Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00953 ATGGCTATGAACCAATCAAAGGCTGTGTTGCTGAGAGTGAGTTTGGTGGTGGTGGCTCTCTGCATAGCAGGATACATAGTGGGTCCCCCTCTCTACTGGCATTTCGTTGAAGGTTTGGCTGCAGTCAGCCACTCTTCTCCTTCTGCTTGTGCCCCCTGCGTCTGTGATTGCTCTTCTCAACCTATTCTTTCCATTCCTCAAGGCCTGAGCAACACTTCCTTTGGAGATTGTGCAAAGTCTGATCCAGAAGTGAGTGGAGACACTGAGAAAAACTTTGCAGAGCTATTGACAGAGGAACTGAAGCTGCGGGAGAACCAAGCCATGGAAAATCAGCAACATGCTGACATGGCACTGCTTGAGGCAAAGAAGTTTGCATCACAGTATCAGAAGGAAGCTGACAAGTGCAATTCAGGGATGGAAACTTGCGAAGAGGCTAGGGAGAAGTCTGAGTTGGCATTAGTGGAGCAGAAGAAGCTAACTGCATTGTGGGAACTTAGAGCACGTCAGAAAGGTTGGAAAGAAGGGCTTGCCAAATCTCATGCACGCTCTCAAGGAAAAGTGCAGAGTTCTTAG 573 0.4834 MAMNQSKAVLLRVSLVVVALCIAGYIVGPPLYWHFVEGLAAVSHSSPSACAPCVCDCSSQPILSIPQGLSNTSFGDCAKSDPEVSGDTEKNFAELLTEELKLRENQAMENQQHADMALLEAKKFASQYQKEADKCNSGMETCEEAREKSELALVEQKKLTALWELRARQKGWKEGLAKSHARSQGKVQSS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00953 190 MobiDBLite consensus disorder prediction 170 190 - -
Vian5g00953 190 PANTHER EXPRESSED PROTEIN 8 182 - -
Vian5g00953 190 Pfam Protein of unknown function (DUF1068) 10 175 IPR010471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00953 Vian-Chr5 30798499 30800630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00953 - - gmx:100527412 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00953 5 30798499 30800630 Vian5g00953 5 30798499 30800630 ECH
Vian11g00658 11 6830760 6842484 Vian5g00953 5 30798499 30800630 PCT