Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00658 ATGGCGAACGAGAAAAGTCTCCCTCTTTATGATAAAATTTGGGTGAAGCACACGTTTTCAAGAACAATGGATTCCTTGATTTTGCTCCTCCTCTTCCTGCTTCTCGGTTATCGTATTTTCCTTGATGACAGCAACACCTTCGCTTTCTTCGTTGCTGTCATATGCGAATCATGGTTCACTTTCGCTTGGATTCTCGTCATCAACACCAAATGGTCTCCTGCATACACCACAACCTACATAGATCGTCTCTTGCTTCGGGTACCTGAGCCTGAGCTTCCACCAGTTGACCTATTTGTGACAACTGCGGACCCTGTTCTTGAGCCACCTATCATCACAATCAACACTGTCTTGTCTCTGTTGGCACTTGATTATCCTACCAACAAGCTAGCTTGCTATGTTTCTGATGATGGATGCTCCCCTCTTAACTTCTATGCCCTTCTCGAAGCTTCTAAGTTTGCCAAGCTTTGGGTACCCTTCTGTAAGAACTACAACATTCAACTTAGAGTGCCCTTCAGATACTTCTCTAACAACACCAACCCTGCAAACAATGAAGATTCACCAGAATTCATTCAAGACTGGCGAAGACTCAAGAAGGAGTACGAGGACCTTTGCAGTAAAATTATGAATGCATCACAAAATTCGATTCCACTTATAGGAGAATTTGCTATCTTCTCCGATACACAGCTTAGAAACCATCCAACCATAATTAAGGTAATATGCGAAAACAAAGGTCTTTCAGACGAGTTGCCACACTTAGTCTACGTATCTAGAGAAAAGAAGCAGGAACATCCACATCATCATAAAGCTGGTGCCATGAATGTGTTGACAAGAATTTCTGGAGTGATGACAAATGCTCCTTTTATCCTGAACGTAGATTGTGACATGTATGTTCATAATCCAAAGATTGTCCAACACGCCCTCTGCATTTTACTAGATTCAAAGGGAGAGAAAGAAGTTGCATTTGCACAATGTATCCAGCAATTCTACGATGGACTGAAGGATGACCCTTTTGGAAATCAACTTGTGGCAAAGTTTATGTACGTAGGTGGTGGGTTAGCAGGGATCCAAGGTATATTTTACGTTGGAACAAATTGCTTGCACAGAAGAAAAGTAATTTATGGCCTTTCTCCTGATCATCACATTCCAAATGGAAAGAAGCATCATGACATCACAGATGGGAAACTCTCAGAAAAGAAAAGAATATTTGGAAGTTCAGAGAGGTTTTTGGAATCAGCTGCTAATGCTTTGGAAGGGAAGACATTGGCTTCCAATGATAAGATTTGGAAATATGTTGAGGCAGCCAAAGAAGTTGGCAGTTCTGAATATGAATACGGCACTGCTTGGGGTAAAAAGGTGGGTTGGATGTATGGATCAATATCAGAAGATGCACTTACAGGACTGAAAATACACACACAAGGATGGAGATCGGAAACGTGTGCACCAGAACTTATACCCTTTATGGGTTGCTCACCTCAGGATATCATAAGTGTAATGAGTCAACAAAAGAGATGGGCCTCAGGGTTGCTTGAGATTCTCCTAAGCAAACACTGTCCAATTTTTGGAACCCTGTTTGCTAAGCTCAAATTCAGACAGTGCTTGGGCTATCTTTGGGTACTCACTTGGGCCGTACGATCTGTTCCTGAAATTTCCTACACTCTTCTTCCTGCTTATTGCATCATCAACAACTATACTTTCTTGCCCAAGGAACCCGGGCAATGGATTCTTGTCACTATGTTTGTGATTTACAACATAACTACTTTTGTAGAGTACTTGAGAACAGGGTTGTCAATTCGAACATGGTTGAACAGTGAAAGAATGGCAAGGATAACGACCACAAATGCTTGGTTTTTTGGATTTTTGCACATCCTGCTTAAGGTATTCGGATTATCAGACAGTGTGTTTGAAATAACAAAAAAAGAGCAATCATCATCCAATGAGAGTGCTAAAGAAAACAATGGTAGATTCACTTTCAACAACTCTCACATTTTTGTACCTGGTACAACTATTTTGCTTATTCAACTCACAGCACTGGTTACCAAGTTGTTGGGATGGCAAGCACCTGTTAGAAATGGTCATGGATCCGGCATAGGAGAACTGTTTTGCTGTTCATATTTGGTTGTGTGCTACTGGCCATTTTTCAAAGAGCTTATCAAGGATGATTGGATTTGGATGTTTTCAATGTATTTTGCTACTTCATATCCTTCTCATTGTATGAGTGCAGAGTTTGTGAGAGAGATGGGTTTGAATTGTGGCGGCGTTGTGGTGAGGTTTGGTTTGTGGGTGGCGGCGCTGTCCATTGCCGGCTACATAGTGGGTCCTCCTCTCTACTGGCACCTCGTCGAACTCCTCAACCATTCTTCTTCTTCTTGCACTCCCTGCGTCTGTGATTATTGTGCAAAGCACGATCCAAAGGTGGATGGAGACACCGAAAACAATGTTGCAGAGCTACTGTCAGAAGAACTAAATCTCCGGGAAACTGAAGCTTTGAAAAATCAGCGTCGTGCTGACATGGGTCTGCTGGAATCTAAGAAGATTGCATCTCAGTATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAGACATGTGAGGAAGCCAGGGAAAAGGCTGAGATGGCCTTAGTGGCTCAGAAGAAGCTCTCTGCATTATGGGAACTGAGAGCTCGTCACAAAGGATGGCAAGAAGGACTTGCCAAATCTAATTCTCGCTCTAAAGGGAAACTGCACTCTGCTTAG 2736 0.4236 MANEKSLPLYDKIWVKHTFSRTMDSLILLLLFLLLGYRIFLDDSNTFAFFVAVICESWFTFAWILVINTKWSPAYTTTYIDRLLLRVPEPELPPVDLFVTTADPVLEPPIITINTVLSLLALDYPTNKLACYVSDDGCSPLNFYALLEASKFAKLWVPFCKNYNIQLRVPFRYFSNNTNPANNEDSPEFIQDWRRLKKEYEDLCSKIMNASQNSIPLIGEFAIFSDTQLRNHPTIIKVICENKGLSDELPHLVYVSREKKQEHPHHHKAGAMNVLTRISGVMTNAPFILNVDCDMYVHNPKIVQHALCILLDSKGEKEVAFAQCIQQFYDGLKDDPFGNQLVAKFMYVGGGLAGIQGIFYVGTNCLHRRKVIYGLSPDHHIPNGKKHHDITDGKLSEKKRIFGSSERFLESAANALEGKTLASNDKIWKYVEAAKEVGSSEYEYGTAWGKKVGWMYGSISEDALTGLKIHTQGWRSETCAPELIPFMGCSPQDIISVMSQQKRWASGLLEILLSKHCPIFGTLFAKLKFRQCLGYLWVLTWAVRSVPEISYTLLPAYCIINNYTFLPKEPGQWILVTMFVIYNITTFVEYLRTGLSIRTWLNSERMARITTTNAWFFGFLHILLKVFGLSDSVFEITKKEQSSSNESAKENNGRFTFNNSHIFVPGTTILLIQLTALVTKLLGWQAPVRNGHGSGIGELFCCSYLVVCYWPFFKELIKDDWIWMFSMYFATSYPSHCMSAEFVREMGLNCGGVVVRFGLWVAALSIAGYIVGPPLYWHLVELLNHSSSSCTPCVCDYCAKHDPKVDGDTENNVAELLSEELNLRETEALKNQRRADMGLLESKKIASQYQKEADKCNSGMETCEEAREKAEMALVAQKKLSALWELRARHKGWQEGLAKSNSRSKGKLHSA 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00658 911 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 380 IPR029044 -
Vian11g00658 911 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 558 IPR029044 -
Vian11g00658 911 Pfam Protein of unknown function (DUF1068) 798 896 IPR010471 -
Vian11g00658 911 Pfam Protein of unknown function (DUF1068) 754 796 IPR010471 -
Vian11g00658 911 Pfam Cellulose synthase 399 717 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian11g00658 911 Pfam Cellulose synthase 95 380 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian11g00658 911 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00658 Vian-Chr11 6830760 6842484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00658 8 718 Glycosyltransferase AT2G32530 45.280 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00658 - - var:108332895 1784.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00658 11 6830760 6842484 Vian5g00953 5 30798499 30800630 PCT