Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00703 ATGGGTCTGTCATTGGTACATGCTCTGTTCTTAACTCTGTTTCTCCTCTGCCTCAAAACAAAAGCAGAGGACTCTAGTCCAACCAGAAAGCTCGCAGGAGCATGCAACTTGTTCAGAGGGAAATGGGTCTACGATGCTTCATACCCTCTCTATGACCCTTCTTCTTGTCCCTTCGTAGATCCACAGTTCAATTGCCAAAAGCATGGTCGCTCTGATCAACTCTACCAGAAATATAGGTGGACGCCATTTTCTTGTCCCTTGCCAAGGTTCAATGGATTGGACTTTTTGCAGAGATACAGAGGGAAGAAGATTATGTTTGTTGGTGACTCCTTGAGCTTGAACCAGTTCAATTCATTGGCATGTATGATTCATGCTTGGGTGCCAAAATCTAGGAGCACTTTCAGTCAAAGGGATGCTCTTTCCAAAGTGACATTTGAGGACTATGGCCTTGAGATATACTTGTACAGAACAGCATATTTAGTGGATCTTGACCGTGAGAAAGTGGGACGAGTTTTGAAACTAGACTCTATCAAGAACGGTGACTCGTGGATGGGGATGGACGCGCTGATCTTCAACACGTGGCACTGGTGGACCCACACCGGAAGCTCACAACCGTACGATGATTCTCTCAGTACAGTTTTCCAATTTGAATGGTTAATGAGTGACAGTGATTTGTAA 678 0.4484 MGLSLVHALFLTLFLLCLKTKAEDSSPTRKLAGACNLFRGKWVYDASYPLYDPSSCPFVDPQFNCQKHGRSDQLYQKYRWTPFSCPLPRFNGLDFLQRYRGKKIMFVGDSLSLNQFNSLACMIHAWVPKSRSTFSQRDALSKVTFEDYGLEIYLYRTAYLVDLDREKVGRVLKLDSIKNGDSWMGMDALIFNTWHWWTHTGSSQPYDDSLSTVFQFEWLMSDSDL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00703 225 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 87 202 IPR026057 GO:0016740
Vian5g00703 225 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 16 208 IPR029962 GO:0016413
Vian5g00703 225 Pfam PMR5 N terminal Domain 34 85 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00703 Vian-Chr5 25530107 25532379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00703 - - pvu:PHAVU_011G1346001 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00703 5 25530107 25532379 Vian5g00703 5 25530107 25532379 ECH
Vian11g00845 11 9268531 9271946 Vian5g00703 5 25530107 25532379 PCT