Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00845 ATGGGTTTCTTGTTTCCAACCCTGTTGTTGTGTCTATCTGTTGTGTTAACTTCCTTCCAAACAAAAGCTCAGGAATTTGACCCCTACTTGAGTGCCAATGTTTCCAGTTTTAGCAGTGGCAGAAAACTTGCAGGAAGATGCAACTTGTTCCGTGGAAAATGGGTGTATGACTCTTCATACCCTCTCTACGACCCTTCTACATGTCCCTTCATAGATCCACAATTCAACTGCCAAAAGTACGGTCGCCCTGACACACAGTATCAGAAATATAGATGGCAACCCTTCTCTTGTCCTTTACCAAGGTTCAACGCATTTGACTTTCTGGCTAAGTATAGAGGCAAGAAGGTTATGTTTGTCGGTGACTCCTTGAGCTTAAACCAGTTCAACTCTCTGGCTTGTATGATTCACTCTTGGGTGCCTCACTCTAGAACCACTTTCACAAAGCAAGAAGCTCTCTCCAAAATCACATTTGAGGACTATGGCCTTGAGTTGTTTCTGTATCGCACACCATATTTGGTTGACCTTGACCGTGAGAGTGTTGGAAATGTTCTGAAGATTGACTCAATCAAGAGCGGTGATGCCTGGAGAGGAATGGACGTGCTAGTTTTCAACACGTGGCACTGGTGGACCCACACCGGGAGTTCACAGCCGTGGGACTATGTTCAAGAGGGTAACAAGTTGTACAAAGACATGAACCGTTTCGTTTTATTCTACAAAGGTTTGACAACTTGGGCTAGATGGGTTAACATCAACGTGAATCCAGCTCAGACCAAAGTCTTCTTTCTGGGAATTTCTCCTGTACATTATGAGGGGAAAGATTGGAACCAACCAGCAAGATCTTGCATGAGTGAGACTGAACCATTCTTTGGTTTGAAGTACCCTGCAGGAACACCAATGGCTTGGGTGATAGTGAACAAGGTTTTGAGTAGGATAAAGAAGCCAGTGTATTTTCTGGATGTGACTACACTGTCACAGTACAGGAAAGATGCACATCCTGAAGGGTACAGTGGCATCATGGCAACTGATTGCAGCCATTGGTGTCTTCCAGGACTGCCTGATACATGGAATGTGCTTCTGCATGCTGCTCTTTTTGGCTGA 1098 0.4481 MGFLFPTLLLCLSVVLTSFQTKAQEFDPYLSANVSSFSSGRKLAGRCNLFRGKWVYDSSYPLYDPSTCPFIDPQFNCQKYGRPDTQYQKYRWQPFSCPLPRFNAFDFLAKYRGKKVMFVGDSLSLNQFNSLACMIHSWVPHSRTTFTKQEALSKITFEDYGLELFLYRTPYLVDLDRESVGNVLKIDSIKSGDAWRGMDVLVFNTWHWWTHTGSSQPWDYVQEGNKLYKDMNRFVLFYKGLTTWARWVNINVNPAQTKVFFLGISPVHYEGKDWNQPARSCMSETEPFFGLKYPAGTPMAWVIVNKVLSRIKKPVYFLDVTTLSQYRKDAHPEGYSGIMATDCSHWCLPGLPDTWNVLLHAALFG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00845 365 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 99 361 IPR026057 GO:0016740
Vian11g00845 365 Pfam PMR5 N terminal Domain 46 97 IPR025846 -
Vian11g00845 365 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 359 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00845 Vian-Chr11 9268531 9271946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00845 - - gmx:100797993 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00845 11 9268531 9271946 Vian11g00845 11 9268531 9271946 ECH
Vian11g00845 11 9268531 9271946 Vian5g00703 5 25530107 25532379 PCT