Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02451 ATGGCATATCAGCGGCGGCGCCAACACTATTATCAACGGTTTCGTGTAGTGATCCCGGTGTTTTCTGCCGTCGCCGCCGCACTACTCTTTCTCTTCGCTCTCCTCTCGTTTTTAGCTCCCTCTCCCGTCGAAACCGATCGTATGCACTTGAAACGACAACACACTACGATTAGCTTTCATGAGGATGTGGCGATTGAACATCCGGCGTTCCGCGTTCCGAGAGACGGAGGAAAGTTGGGACGCGATATCTGGACTTCTCGAAATTCAGAGCACTTCTACGGCTGTAGCAATTCCAGCAACAAGTTTCAAAAAGCTCAAGTGATTACACTTCCGAATCGATATTTGTTGATTGCGACAAGTGGAGGCTTGAATCAGCAAAGAACGGGGATTACAGATGCTGTTGTTGTTGCACGAATTTTGAATGCTACGCTTGTTGTTCCAAAATTGGATCAACGATCTTTCTGGAAAGATTCTAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTATATCACATCTTTCCAAAGATGTCAAGATTATAAAGCAACTTCCCAGTAAGGGTAGGAAACCATTATCTGCATACAATATGCGGGTTCCAAGGAAGTGTAATGAAAGATGTTATATAACTCGCATATTACCTGTAATCATGAAAAAGCATGCTGTCCAGCTTAGCAAATTTGACTACAGGCTTGCAAACAGGTTGGATACAGAATATCAGAAGTTGAGATGTAGAGTTAACTACCATGCTTTAAAATTTACCAGCCCAATACTTGGAATGGGGGAAAAATTGGTCCATTGGATGAGGATGAGAAGTAAACATTATATTGCACTGCACCTAAGATTTGAACCTGATATGCTGGCATTTTCTGGATGTGATTATGGTGGAGGAGAGAAGGAGCAGAAAGAACTAGGCGCAATAAGGCGGAGGTGGAAGACATTACATAGAAGCAATCCTGATAGGGCAAGGAGGCAGGGAAGATGCCCATTAACCCCAGAAGAAGTTGGTCTCATGCTAAGAGCATTGGGATATGGTTCTGATGTTCATATTTACGTTGCATCAGGGGAAGTATATGGAGGGGAAAGAACACTGGCGCCTCTCAAGGAATTGTTTCCTAATTACCATTCAAAAGAGACCATTGCTACCAAGGAAGAATTACAATCATTTTCTTCATTTTCTTCTCGCATGGCTGCTCTTGACTTCATTGTCTGTGATGAAAGTGATGTATTTGTAACCAATAATAATGGAAATATGGCAAAAATTTTAGCTGGACGAAGGAGATACTTTGGGCATAAACCAACCATTCGTCCAAATGCTAAAAAACTCTACCGATTGTTCTTGAATAGAAGAAACATGACTTGGGATGTTTTTGCGTCCAGTGTCCGTAATTTCCAGAGAGGCTTCATGGGGGAGCCAAAGGAGGTTAGACCAGGTAGAGGCGGATTTCATGAGAATCCATCGACCTGCATATGTGAAGATTCCACAGCCAAAGTTGAGAAACATTCAGGACCTCGAAAACATGGAAAGGATAATACAACGAATAGAAATGCATCAAATGATGAACCGGATGTTGACAATGAGGCTGAATGGCCAGAAATGGATGATGATGATGATGATCAGAATGATCTAGCAGATAAGGGTACATTCAATGAAACATTTTCGGACTATGATGCTATGAACTTCGAGGATCCTGATTTAGAGGAAATTATATCAGATTAG 1719 0.4194 MAYQRRRQHYYQRFRVVIPVFSAVAAALLFLFALLSFLAPSPVETDRMHLKRQHTTISFHEDVAIEHPAFRVPRDGGKLGRDIWTSRNSEHFYGCSNSSNKFQKAQVITLPNRYLLIATSGGLNQQRTGITDAVVVARILNATLVVPKLDQRSFWKDSSNFSEIFDVDWFISHLSKDVKIIKQLPSKGRKPLSAYNMRVPRKCNERCYITRILPVIMKKHAVQLSKFDYRLANRLDTEYQKLRCRVNYHALKFTSPILGMGEKLVHWMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEKEQKELGAIRRRWKTLHRSNPDRARRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGERTLAPLKELFPNYHSKETIATKEELQSFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNRRNMTWDVFASSVRNFQRGFMGEPKEVRPGRGGFHENPSTCICEDSTAKVEKHSGPRKHGKDNTTNRNASNDEPDVDNEAEWPEMDDDDDDQNDLADKGTFNETFSDYDAMNFEDPDLEEIISD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02451 572 PANTHER O-FUCOSYLTRANSFERASE 16 7 541 - -
Vian4g02451 572 MobiDBLite consensus disorder prediction 494 572 - -
Vian4g02451 572 MobiDBLite consensus disorder prediction 558 572 - -
Vian4g02451 572 PIRSF UCP009360 2 499 IPR024709 -
Vian4g02451 572 CDD O-FucT_plant 114 434 IPR024709 -
Vian4g02451 572 MobiDBLite consensus disorder prediction 523 542 - -
Vian4g02451 572 MobiDBLite consensus disorder prediction 494 522 - -
Vian4g02451 572 Pfam GDP-fucose protein O-fucosyltransferase 114 428 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02451 Vian-Chr4 41125001 41130026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02451 114 445 Miscellaneous Gene Families AT1G22460 50.296 4.59e-98 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02451 - - gmx:100817698 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02451 4 41125001 41130026 Vian4g01078 4 17338500 17340456 ECH
Vian4g02451 4 41125001 41130026 Vian4g02451 4 41125001 41130026 ECH