Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01078 ATGACGGTTACAAAACAGAGGTTGGTGGATCGGCTGAGATCACAAGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGCTGTCTTTTACGGGTTGCTCTTATGGTCTCACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAGCGATAAATTCAACAGAACAGAGAATTGGAGGATTTTGTCCACTTACTCCAAAGGAGGTGGGCATTTTTCTTCACGCTCTTGGATACCCACCATCCACACCAATATACATAGCAGCTGGAGAGATCTATGGTGGTAATACTCATCTTTCGGAGCTCTCATCCCGTTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTCACTAATCATGCTTCCCAAACTGCTGCACTTGATTACATAATATGCGTAGAGAGTGATGTATTTGTTCCGTCATATTCGGGAAATATGGCAAGAGCAGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATCAATCCAGACAGGAAAGGTCTGGTTGGAATTTTTGATATGGTGGAAACTGGAGTGCTTGAAGAAGGAAAGGAACTGTCGCAAATGGTTCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCATGGTTCTCCACCAGGAGTCAAAGGCCGGGCACGATTTAAGACTGAAGAGTCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTAGAAATAACATGA 789 0.4246 MTVTKQRLVDRLRSQGGRYIALHLRYEKDMLSFTGCSYGLTDAESEELRILRENTNYWKVKAINSTEQRIGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATPEELKDFTNHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFDMVETGVLEEGKELSQMVQRMHKNRQGAPRKRHGSPPGVKGRARFKTEESFYENPYPECICGSKSKLEIT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01078 262 MobiDBLite consensus disorder prediction 216 231 - -
Vian4g01078 262 Pfam GDP-fucose protein O-fucosyltransferase 6 174 IPR019378 -
Vian4g01078 262 Gene3D - 2 183 - -
Vian4g01078 262 MobiDBLite consensus disorder prediction 214 238 - -
Vian4g01078 262 PANTHER OS02G0726500 PROTEIN-RELATED 5 254 - -
Vian4g01078 262 FunFam O-fucosyltransferase 28 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01078 Vian-Chr4 17338500 17340456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01078 8 253 Miscellaneous Gene Families AT1G22460 61.382 5.31e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01078 - - ccaj:109819362 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02451 4 41125001 41130026 Vian4g01078 4 17338500 17340456 ECH
Vian4g01078 4 17338500 17340456 Vian4g01078 4 17338500 17340456 ECH