Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01787 ATGGACAAGACTAAGTTGAGACAACAAGCGCTCTTCATACGAACTTCACTCTTTGATCAGGGATTCCTTGACGAGCAATTCATTCAGTTAGAAGAACTGCAAGACGATGTTAATCCCAATTTTGTTGAAGAAATTGTGACCCTTTTCTACAGTGACTCTGTAAGACTGATCTACAACATAGAAAGAGGACTGATGAGTAACCCTCCAAATTTCACCAAGCTAGATGATTTCATGCATCAATTCAAGGGTAGTTGCTCAAGTAAAAACAACCTTGAAGTTTTCATTGGCAGCATTGGAGCAAAGAAGGTGAAGACTGAATGTAGCAGATTCAGTGAATACTGCGCAGCAGAAAACTTTGAGGGGTAA 366 0.3989 MDKTKLRQQALFIRTSLFDQGFLDEQFIQLEELQDDVNPNFVEEIVTLFYSDSVRLIYNIERGLMSNPPNFTKLDDFMHQFKGSCSSKNNLEVFIGSIGAKKVKTECSRFSEYCAAENFEG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01787 121 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 8 121 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vian4g01787 121 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 13 121 IPR036641 GO:0000160
Vian4g01787 121 Gene3D HPT domain 1 121 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01787 Vian-Chr4 34133136 34134696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01787 K14490 - gmx:100780856 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01787 4 34133136 34134696 Vian4g01787 4 34133136 34134696 ECH
Vian11g00197 11 1794549 1795608 Vian4g01787 4 34133136 34134696 ECH