Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01375 ATGGCTTGTGTGGCACTTCGTCCTATGCGTGAAGAATCTTTCAACACTGGTGGTAAATTCACCGGCTGCTTCAGTCCTCGTTTGAGGGACTCAATTTTGATTTACCTAACTGTTGGTGGATCTGTGATTCCTTTGCGTATTATGAAGACAGATTCAATTGCTTCAGTGAAGCTGAGAATTCAAACCTTTAAAGGATTTTTTGTAAAAAAACAGAAACTGGTTTTTGAAGGGAAGGAGTTGGCTCGTAACAGATCCTGTATCCGTGATTATGGGGTTGGTGATGGGAATATTTTGCACCTGGTGCTGAGGCTTTCTGATGTCAAAGCTATTACAGTTAAGACTCTGTGTGGAAAGGAGTTTGGGCTTTATGTTGAGAAGAGTAGGAGTGTCGGTTATGTAAAGCAGCAGATTGCAAACAAAGGGCAAGGGTTAGTAGATCTCAAGGATCAAGAACTGATATGTGAGGGTGAGGCACTTGAAGACCAGAGGCTTATTGAGGATATCTGTAAGGACAATGATGCTGTAATTCATTTTTTGGTCAGAATATCAGATGCCAAGGTAAGGACTAAACCAGTCGAGAAGGATTTTGAATTATCAATTGAGGCATCATATGTAGACAATCCGGTGTCAAATTTACATGAAAACCAGTTAGGGCCAGTCTCTGTAAGAAATGAGTTCCTGGAGAGGAATCAATTATCAAGGGATTATCTTGTGGAACCAATTATTATGAATTCCAACATGAAAATTCCACCAGTGATTGACAAGATAATTAAGATGACTTTAGAGGGGTTAGAAAATGGCTTCAAACCAATTCAATCTCCAGAGGGATCAGGAGGAGCGTATCTCATGCAAGATTCATCTGGCTTGAAGTATATTTCTGTTTTCAAACCCGTTGATGAAGAGCCAATGGCAATTAATAACCCTCGAGACTTACCTATTTCCGAGGATGGTGAAGGGCTAAAGAAAGGTACAAGGGTTGGGCAAGGTGCGTTGAGAGAAGTTGCTGCTTACATTTTGGATCATCCTAAGAAAGGACCACGCTCCTATCATAACAATGATGAACCAGGATTTGCTGGAGTTCCACCTACAATCATGGTCAAATGCGTGCATAAAGTATTTCATAATGTTGAAGATTATCAAAATGTTTCAGGTAATGCTAAAATAGGATCGCTTCAGATGTTTATGAAGAATATTGGAAGTTGTGAAGACATAGGTCCTAGTGCTTTTCCAGTGGAAGAGGTACACAAGATCTCTGTACTGGATATCAGATTGGTAAATGCAGATAGGCATGCTGGCAACATTTTGATTTCCAAGGATGGTGAAGACGGTCATACAATCCTCATTCCAATTGATCATGGCTATTGCTTGCCTGAGAGCTTTGAAGACTGCACTTTTGACTGGTTATACTGGCCACAAGCTAAGGAACCTTACTCTGCAGACACCATTGATTACATAAAATCTCTGGATGCTGAAGAAGATATAAAGCTTTTGAAGTTTCACGGATGGGATCTTCCTGCTAAGTGTGCCCAGATCCTTCGTATATCAACCATGCTTCTTCAGAAAGGTGCAGAGAGGGGACTCAGTCCTTTTGCCATAGGAAGCATCATGTGTAGAGAAACACTGAAGAAAAAATCTGTGATTGAACAGATTGTGCAGGAAGCTGAGGAAGGTGCATTTCCTGGAGCAAGTGAAGCTGCATTTGATGATCTCGTTTCAGTGATCATGGATTGTCATTTGGATGAGCTATTCCGGTGA 1755 0.4103 MACVALRPMREESFNTGGKFTGCFSPRLRDSILIYLTVGGSVIPLRIMKTDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNRSCIRDYGVGDGNILHLVLRLSDVKAITVKTLCGKEFGLYVEKSRSVGYVKQQIANKGQGLVDLKDQELICEGEALEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDFELSIEASYVDNPVSNLHENQLGPVSVRNEFLERNQLSRDYLVEPIIMNSNMKIPPVIDKIIKMTLEGLENGFKPIQSPEGSGGAYLMQDSSGLKYISVFKPVDEEPMAINNPRDLPISEDGEGLKKGTRVGQGALREVAAYILDHPKKGPRSYHNNDEPGFAGVPPTIMVKCVHKVFHNVEDYQNVSGNAKIGSLQMFMKNIGSCEDIGPSAFPVEEVHKISVLDIRLVNADRHAGNILISKDGEDGHTILIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSADTIDYIKSLDAEEDIKLLKFHGWDLPAKCAQILRISTMLLQKGAERGLSPFAIGSIMCRETLKKKSVIEQIVQEAEEGAFPGASEAAFDDLVSVIMDCHLDELFR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01375 584 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 267 566 IPR000403 -
Vian4g01375 584 Pfam Phosphatidylinositol 3- and 4-kinase 276 529 IPR000403 -
Vian4g01375 584 SUPERFAMILY Protein kinase-like (PK-like) 418 582 IPR011009 -
Vian4g01375 584 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
Vian4g01375 584 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Vian4g01375 584 FunFam Phosphatidylinositol 4-kinase gamma 4 29 108 - -
Vian4g01375 584 CDD Ubl_ubiquitin_like 110 177 - -
Vian4g01375 584 SUPERFAMILY Ubiquitin-like 37 105 IPR029071 -
Vian4g01375 584 Gene3D - 108 197 - -
Vian4g01375 584 SUPERFAMILY Ubiquitin-like 105 183 IPR029071 -
Vian4g01375 584 SMART ubq_7 108 181 IPR000626 GO:0005515
Vian4g01375 584 SMART ubq_7 32 103 IPR000626 GO:0005515
Vian4g01375 584 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 41 556 IPR044571 -
Vian4g01375 584 Pfam Ubiquitin family 110 181 IPR000626 GO:0005515
Vian4g01375 584 Pfam Ubiquitin family 38 104 IPR000626 GO:0005515
Vian4g01375 584 Gene3D - 29 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01375 Vian-Chr4 27846670 27849333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01375 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 59.552 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01375 - - gmx:100812724 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00533 9 5920528 5923125 Vian4g01375 4 27846670 27849333 ECH
Vian4g01375 4 27846670 27849333 Vian4g01375 4 27846670 27849333 ECH