Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00983 ATGTCTCACAGTCCTCTGACTTTTCTCTTTGGGGTACTAGGTAATGTTACGTCCTTCGTTTGTTTCTTGGCACCACTACCGACATTTTATAGAGTTTGTAAGAAGAAATCAACAGAAGGGTTCCAATCAATTCCATATGTGGCTGCACTCTTCAGTGCAATGCTTTGGATCTTCTATGCCTATGTCAAGACTGGAGAAACGCTTCTTATCACCATCAATTCATTCGGTTGTGTGATAGAGACAATTTACCTTGCCATATTTATCACTTACTGTCCCAAGAAAGTTAGGATGTCGACATTGAGGATGATTGTTTTGTTTAATTTTGGAGGATTTTGCACGATTGTCCTCCTAACCCACTTACTAGCAAAAGGGGCTGGCCGTGTCAAGCTTCTAGGATGGATTTGTGTGGTCTTCGCTACTAGTGTTTTTGCAGCACCTTTAAGCATTATTAGGGTGGTTATTCGGACCAAAAGCGTAGAGTTCCTTCCCTTCCCTCTTTCAATGCTCCTTCTGCTAAGCGCAATCATGTGGCTGTTATATGGTATTTCGTTGAAGGATATCTATGTGACGTTGCCGAACGTTGTGGGGTTAACATTTGGAGTCTTTCAGATCGTGCTCTACGCAATGTACAGAAACAACAAGACCGTAAAGGACGAGAAGCTACCAGAACACAAAGGAGATATCGACAACAATGAAAACGCTGCTCCAACTGTGTCAGGTGAGACCCAAGAACAAGTGAACACTGACGCTGGAGATATAGAGATTGGGGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAGGAAGACACAGTAGCTGAGGAGAAGCGTGACAAAACATGTCTCAGCAACAACAATAATAACAACGAAAACAACAAGAAAACAGAGGAGAAGGAGAGTAGCGAAGTTTGA 909 0.4246 MSHSPLTFLFGVLGNVTSFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINSFGCVIETIYLAIFITYCPKKVRMSTLRMIVLFNFGGFCTIVLLTHLLAKGAGRVKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSMLLLLSAIMWLLYGISLKDIYVTLPNVVGLTFGVFQIVLYAMYRNNKTVKDEKLPEHKGDIDNNENAAPTVSGETQEQVNTDAGDIEIGEKKEEKKEEKKEDTVAEEKRDKTCLSNNNNNNENNKKTEEKESSEV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00983 302 MobiDBLite consensus disorder prediction 251 280 - -
Vian4g00983 302 FunFam Bidirectional sugar transporter SWEET 8 96 - -
Vian4g00983 302 Gene3D - 9 94 - -
Vian4g00983 302 MobiDBLite consensus disorder prediction 221 302 - -
Vian4g00983 302 PANTHER RAG1-ACTIVATING PROTEIN 1 16 270 IPR047664 -
Vian4g00983 302 Gene3D - 127 221 - -
Vian4g00983 302 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016020
Vian4g00983 302 Pfam Sugar efflux transporter for intercellular exchange 9 94 IPR004316 GO:0016020
Vian4g00983 302 FunFam Bidirectional sugar transporter SWEET 127 219 - -
Vian4g00983 302 Coils Coil 257 298 - -
Vian4g00983 302 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00983 Vian-Chr4 14792825 14794550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00983 2 257 Miscellaneous Gene Families AT5G23660 53.137 3.95e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00983 K15382 - gmx:100810426 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03776 1 60717358 60719233 Vian4g00983 4 14792825 14794550 PCT