Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03776 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTATTCGGTCTTTTGGGCAACATCATCTCCTTTGGAGTGTTTCTGGCTCCATTGCCAACTTTTTACCAAATCTTCAAGAAGAAATCCACTGAAGGATATCAGTCACTTCCTTACGTTGTTGCACTTTTCAGTGCAATGCTTTGGATTTACTATGCATTCGTGAAAAGAGAAGCTGCTCTTCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCAATTTACCTTACAATCTTCCTAGTTTACGCTCCAAGGAAGCCTAGGCTTACTACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGCTTCGGAGCCATGCTTCTGTCAACTCTCTACCTGTCTAAGGGAGCAAAGCGTCTTGCCATCATAGGATGGATTTGCCTTGTTTTCAACATCAGTGTCTTTGCTGCACCTCTCTTCATTATTAGGCGAGTGATTAAGACAAGGAGCGTGGAATATATGCCATTTACCTTGTCCATGTTTTTGACCATCAATGCTGTTATGTGGTTCTTCTACGGCCTTCTTCTCAGGGACTATTATGTTGCTCTCCCAAACACACTTGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTATTTGATGTACAGAAACGCCACCCCAGTTGCACTAGATGAGCCGGTGAAGGCTCAAGAAGCGAATGGCCACATAGTTGGAGCTGTGAAGATGGGAACAATAGAGCCAAACCATGCAGGTGGTGGTCTTGGTGGTGTTGGCAAAGTCTGA 777 0.4414 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIFKKKSTEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLTIFLVYAPRKPRLTTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLMYRNATPVALDEPVKAQEANGHIVGAVKMGTIEPNHAGGGLGGVGKV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03776 258 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Vian1g03776 258 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Vian1g03776 258 Gene3D - 11 97 - -
Vian1g03776 258 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Vian1g03776 258 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Vian1g03776 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Vian1g03776 258 Gene3D - 129 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03776 Vian-Chr1 60717358 60719233 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03776 1 245 Miscellaneous Gene Families AT5G50800 56.504 2.01e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03776 K15382 - gmx:100805676 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03776 1 60717358 60719233 Vian1g03776 1 60717358 60719233 ECH
Vian1g03776 1 60717358 60719233 Vian4g00983 4 14792825 14794550 PCT