Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00911 ATGGTTTCTTCTCGTGGTCTAACTACTAAGCAACCACTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTGCCACGATATTATAGGCACAGTATTCTTGTGTTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATATGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGGTGCTGTACAGAAAGTTGTGGACGAATTTGAGAAGTTCAAGGGGGGACCTGTGTATCATATGATTGGAAATCACTGCCTATACAATCTCCCTCGCAGCCAGTTGCTTCCGTTATTGAAGATCCAAAGTCTTGATGGCCGTGCATACTATGATTTTTCACCGGTGCCTGAATATAGATTTGTAGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCACAAGATCATCCCAAAACATTGGAGGCCATGAAAATCCTTCGGGAGAAGAATCCAAATGAAAATATGAACAGTCCAGATAATTTGGAGGGCCCTGAAAGAAGGTTTGTCATGTTTAATGGGGGTCTTGGAAAGGAACAGATGGAATGGTTGGATGGAGTTCTCCTGGATGCGACAATATTGAATCAGAAGGTGATTGTCTGTTGCCATTTGCCTCTGGATACTGGTGCGGCAAATTTGGATACACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACACAGATACAATTGCGTTAAGGCCTGTCTCGCAGGGCATGATCATATAGGTGGATACTCCATTGATTCTCATGGGATACACCATAGAGTTTTTGAGGCTGCTTTGGAATGTCCTCCTGGTACGAGTGCATTTGGATACATTGAAGTCTACGACGACAGGATATCACTAATCGGAACTGACAGAATGGAAAGTACAGACATGCATTTTAGCCCCCGAAGTTAA 963 0.4185 MVSSRGLTTKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHMFVINFGDIVDGFCPKDQSLGAVQKVVDEFEKFKGGPVYHMIGNHCLYNLPRSQLLPLLKIQSLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEAMKILREKNPNENMNSPDNLEGPERRFVMFNGGLGKEQMEWLDGVLLDATILNQKVIVCCHLPLDTGAANLDTLLWNYDEVMNLIHRYNCVKACLAGHDHIGGYSIDSHGIHHRVFEAALECPPGTSAFGYIEVYDDRISLIGTDRMESTDMHFSPRS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00911 320 SUPERFAMILY Metallo-dependent phosphatases 12 313 IPR029052 -
Vian4g00911 320 Pfam Calcineurin-like phosphoesterase 15 263 IPR004843 GO:0016787
Vian4g00911 320 Gene3D - 9 309 IPR029052 -
Vian4g00911 320 CDD MPP_Nbla03831 14 303 IPR041869 -
Vian4g00911 320 PANTHER - 6 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00911 Vian-Chr4 12946632 12947594 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00911 K01517 - gmx:100792911 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00911 4 12946632 12947594 Vian4g00911 4 12946632 12947594 ECH
Vian4g00911 4 12946632 12947594 Vian1g01249 1 13489024 13489998 PCT