Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01249 ATGGGTTCTGCTAACGGACTGATTAACGCAGAGAGGAAACAGCCTCTATTTTCTTTTGGATTGATATCGGACGTGCAGTATGCTGACATTCCTGATGGTAGGTCATTTCTTGGTGTTCCACGTTACTATAGGCACAGCATTCTTGTGTTGCAGAGAGCAGTAAAACATTGGAATACTAATAAGAACCACAAGTTTGTGATAAATTTTGGAGATATTGTTGACGGATACTGTCCAAAAGATCAATCTCTTAACACTGTAAAGAAAATTGTTAATGAATTTGAGATGTTCAACGGACCAGTTTATCATTTGATTGGCAATCACTGCCTTTACAATCTGCCTCGGAGTAAGTTACTTCCATTATTGAAGATCAAGAGTTTTGGAAGCCATGCTTACTATGACTTTTCGCCAGTGCCAGAATATAGATTCGTAGTCCTTGATGGGTATGACATAAGTGCAATTGGCTGGCCACAAGACCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAAAAGAATCCGAACGATGACAAGAACAGCCCGACAGGTTTGGTGGGCCTCGAAAGAAGGTTTCTTATGTTCAATGGGGCTGTTGGAAAGGAACAAATGGAATGGTTGAACAGTGTTCTTCAGGAAGCAACAAAATTGGAACAGAAGGTAGTAATATGCTGCCACATGCCTCTAGATCCTGTTGCATCATCCAACGAGGCACTGCTATGGAATTACGATGAAGTAATGAATTTGATACACAGATACACTTGTGTAAAGTTGTGTGTATCTGGACATGATCACAAGGGAGGGTATTCCGTTGATTCCCATGGAATTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTGCTGGCACGGATTCGTTTGGATATGCTGAAGTTTTTGACGACAAAATATCACTTTATGGTACGGGCAGAATGCGAAGTAAAGACATTTACTTTCATTCTTCAGCAGATTTGTAA 975 0.4113 MGSANGLINAERKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKHWNTNKNHKFVINFGDIVDGYCPKDQSLNTVKKIVNEFEMFNGPVYHLIGNHCLYNLPRSKLLPLLKIKSFGSHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNDDKNSPTGLVGLERRFLMFNGAVGKEQMEWLNSVLQEATKLEQKVVICCHMPLDPVASSNEALLWNYDEVMNLIHRYTCVKLCVSGHDHKGGYSVDSHGIHHRVLEAALECPAGTDSFGYAEVFDDKISLYGTGRMRSKDIYFHSSADL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01249 324 PANTHER - 10 319 - -
Vian1g01249 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Vian1g01249 324 Gene3D - 12 311 IPR029052 -
Vian1g01249 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Vian1g01249 324 SUPERFAMILY Metallo-dependent phosphatases 15 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01249 Vian-Chr1 13489024 13489998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01249 K01517 - gmx:100808714 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01249 1 13489024 13489998 Vian1g01249 1 13489024 13489998 ECH
Vian4g00911 4 12946632 12947594 Vian1g01249 1 13489024 13489998 PCT