Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00909 ATGCAAGACGCAATTGGGATTCCAGCTTGCTTCTCTTCGGCTTTGAAATCAAGTGATGATCACACAACCGTGACCCGTTCAGGCCAGAGCGTGCACATGTCCGTCTACAGAACAAAGATTGCTGACCACTGCCGCTTGATCACCGTCACATGGTGCAAAAACTTGATGCTCCATGGCCTCTCAGTCTCAGTGGAAGGCCCAGAGGGGGAGGCACAGTACAGCTGCAAGGTCGAGCTCAAACCATGGTACTTTTGGAGAAAACAAGGTTCCAAGCGGTTCCTCGTACACGGTAACAAAGCCGTTGACGTTTTCTGGGACCTTAAGGCTGCGAAATTCAACGGCGAGACGGAACCAACCGCGGAGTACTACGTTGCAGTGGTGTGCGAGCAAGAGGTGGTACTCCTGGTGGGTGATTTGAGGAAAGAAGCGTACAGAAGAACCGGGTGCAGACCAGCACTGATTGACCCGATTCTGATTTCGAAAAAAGAGCACATCTTTGGGAAGAGAAAGTTCTCGACAAGAGCGAAGTTTGAGGAGAAGGGTAGGTGCCATGAGATCTCAATCGAGTGCAAGAACAAAAGCGACATCGGAGGGGAATCGCCGTCAAGTGGGGTTCAAGTTCAGCCAGAGATGGAGATAAGATTGGACGGGCACGTGATGATCCACGTGAAGCACTTGCAGTGGAAGTTCAGAGGGAACGAATCAATTCATCTGAACAAGATGAGAGTGGAAGTGTATTGGGATGTGCACGATTGGCTCTTTAGTCCTGGTTTGAAACACGCTTTGTTCATTTTTAAACCTGTTTTATCATCCATGTTGTCCATGTCTGTGTCATCATCGTCGCCACCGTTATCGTTGTCGTCAACATCCACACCATTATCGACTCAAACGGGGAGCTCTGGATCCTTGGAGGGGTTCAGTGTAAACGAATCATCGGAATTTTTCTTGTTTCTATATGCTTGGAAAGTTGAGTAA 975 0.4872 MQDAIGIPACFSSALKSSDDHTTVTRSGQSVHMSVYRTKIADHCRLITVTWCKNLMLHGLSVSVEGPEGEAQYSCKVELKPWYFWRKQGSKRFLVHGNKAVDVFWDLKAAKFNGETEPTAEYYVAVVCEQEVVLLVGDLRKEAYRRTGCRPALIDPILISKKEHIFGKRKFSTRAKFEEKGRCHEISIECKNKSDIGGESPSSGVQVQPEMEIRLDGHVMIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSMLSMSVSSSSPPLSLSSTSTPLSTQTGSSGSLEGFSVNESSEFFLFLYAWKVE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00909 324 PANTHER EXPRESSED PROTEIN 7 322 IPR008586 -
Vian4g00909 324 Pfam Plant protein of unknown function (DUF868) 27 322 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00909 Vian-Chr4 12917445 12918419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00909 7 324 EF-hand Containing Proteins AT5G28150 38.080 2.32e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00909 - - gmx:100816323 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00909 4 12917445 12918419 Vian4g00909 4 12917445 12918419 ECH
Vian1g01246 1 13473366 13474343 Vian4g00909 4 12917445 12918419 PCT