Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01246 ATGATGCAGGACTCAATTGGGATCAATATTCCTGCTTGTTTTTCTTCTTCAGCAGAGAAGCAGCACGGTGACGATCATGGAGCGGTGACCCGTTCAGGCCAGAGCGTTTACATGTCTGTGTACAGAACAAAGGTTGCGGACCACTGCCGTTTGATCACCATCACATGGTGCAAAAACCTCTTGCTTCACGGGCTTTCGGTGTCAGTGGAAGGCCCTGAAGGAGAAGAACAGTACACGTGCAAGGTGGAGGTGAAGCCATGGTACTTTTGGAGGAAGCAAGGCTCCAAACGCTTCATAGTGGATGGTAAAGCAGTTGATATTTTCTGGGACCTTAAGGCTGCGAAATTTAACGGTGAAACGGAACCGACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAAGTGGTGCTGCTGCTGGGTGATCTAAAGAAAGAGGCACACAGAAGGACGGGGTGCAGGCCAGCACTTATTGACCCCATTTTGGTTTCAAAGAAAGAGCATATTTTTGGGAAGAAAAAGTTCTCCACAAGAGCCAAGTTTCATGAGAAGGGTAGGTGGCACGAGATTTCAATTGAGTGCAAGAACAAGGGATATAATGGGGAGTCTCCGAGTGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACCTCCAGTGGAAGTTTAGAGGCAACGAGTCAATTCATCTCAGCAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTATTTAGTCCTGGTTTAAAGCATGCTTTATTCATTTTTAAGCCAATTTTATCACCCAGTACCACCAGCACTTGTTCTATGTCGTCTTCGTCACCTTCGTTATCATCCTCATCACCTCCCTTATCTACTGATCAGACAAGGAGTTCTAGATCAGTAGAGGGATTTAGTGTTAGTGGGTCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAGGTAGAATGA 978 0.4591 MMQDSIGINIPACFSSSAEKQHGDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYTCKVEVKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAHRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGYNGESPSGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSPSTTSTCSMSSSSPSLSSSSPPLSTDQTRSSRSVEGFSVSGSSEFCLFLYAWKVE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01246 325 PANTHER EXPRESSED PROTEIN 10 323 IPR008586 -
Vian1g01246 325 Pfam Plant protein of unknown function (DUF868) 32 323 IPR008586 -
Vian1g01246 325 MobiDBLite consensus disorder prediction 280 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01246 Vian-Chr1 13473366 13474343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01246 9 325 EF-hand Containing Proteins AT5G28150 37.618 7.95e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01246 - - gmx:100779755 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01246 1 13473366 13474343 Vian1g01246 1 13473366 13474343 ECH
Vian1g01246 1 13473366 13474343 Vian4g00909 4 12917445 12918419 PCT