Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00826 ATGGCAGGAGGAGGAGCTCCAGCAAAATCAGATGAACCACAGCCTCACCCTCCAAAGGATCAGCTTCCCAATATTTCTTACTGCATCACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTCGGCACAACAGTGCTGATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATAATGAGAAGGCAAGAGTTATTGAAACGCTACTTTTTGTAGCTGGTATTAACACATTGTTGCAAACATTGTTTGGAACTCGATTGCCTGCAGTTATCGGAGGGTCTTACACCTTTGTTCCAACCACAATCTCTATTATCCTCGCAGGCCGATTCAGTGATGAACCAGATCCTATAGAGAGATTTAAGAGGATAATGAGGTCAATCCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTGGGCTTCAGTGGTCTTTGGAGGAATGTTGCAAGGTTCTTAAGTCCACTTTCATCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGGTTCCCTGGGGTTGCTAAATGTGTAGAGATCGGACTGCCTCAGCTTATATTGATCGTGTTTGTTTCACAGTATGTGCCTCACGTGCTACATTCGGGGAAAAATATCTTTGACAGATTTGCTGTGATATTTACTGTTGTAATTGTGTGGATATACGCTCATCTACTTACTGTTGGAGGTGCCTATAATGATGCTCCACCTAAAACTCAAATATCCTGCCGCACTGATCGTGCTGGACTTATAGATTCTGCTCCTTGTCTTGTGAGTGTTTGCGGGGATTGTGGTAGTTTTGTCAGGGATGGATTGTTTCGGCCACCATCTAATCCACTGTCGCAAGATGGACTCAACATTAAATTATTGGCAACTGGCTGTGATAGGATAAGAATTCCATATCCCTTTCAATGGGGAGCACCTTCCTTTGATGCAGGTGAAGCCTTTGCCATGATGATGACAGCTTTTGTTGCTCTTGTAGAGCCATTGATTATACTAGAGTTCAACCATAATATAATAGTGCTATACTTGCGTGATGACATTCTTGCATTATCTGGCTTGTATACTTTTGCTTTGGCTCAGTATCAGTGTTATGCAGTTACTAAGTTGCATGCTTGGACTAAATTATTTGCTAATGCATGTTTCATTTGTCACAAACAGTCCAGTGGAGCTTTCATTGCTGTTTATAGGTATGCAAGTGCAACACCATTACCACCATCTATTCTGAGCAGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTCAATGGATCTTCTGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACACGAGTTGGAAGTAGGAGAGTGGTGCAAATATCTGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTTGCCTCCATCCCACCTGCCATTATTGCTGCCCTCTACTGCTTGTTCTTTGCTTATGTTGGTGCTGGTGGTCTCAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAATTCATTTTAGGCTTCTCAATCTTCTTGGGCTTGTCTGTGCCGCAGTACTTCAATGAGTACACAGCCATTAATGGTCATGGTCCAGTCAACACAGGCGGAAGATGGTTCAATGATATTATCAACGTGCCATTCCAATCAAAACCATTTGTTGCGGGTGTTGTGGCATATTTTCTGGACAACACATTATTTAAGAGAGAAGGAAGCATTAGGAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTTCAAGGGTGACACAAGAAGTGAGGAGTTCTATTCACTGCCTTTCAATCTAAACAAGTACTTCCCCTCTGTTTAA 1893 0.4268 MAGGGAPAKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNNEKARVIETLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSDEPDPIERFKRIMRSIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPQLILIVFVSQYVPHVLHSGKNIFDRFAVIFTVVIVWIYAHLLTVGGAYNDAPPKTQISCRTDRAGLIDSAPCLVSVCGDCGSFVRDGLFRPPSNPLSQDGLNIKLLATGCDRIRIPYPFQWGAPSFDAGEAFAMMMTAFVALVEPLIILEFNHNIIVLYLRDDILALSGLYTFALAQYQCYAVTKLHAWTKLFANACFICHKQSSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPAIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGHGPVNTGGRWFNDIINVPFQSKPFVAGVVAYFLDNTLFKREGSIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00826 630 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 340 - -
Vian4g00826 630 Pfam Permease family 37 340 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian4g00826 630 Pfam Permease family 393 540 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian4g00826 630 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00826 Vian-Chr4 10873866 10879356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00826 9 629 Organic Solute Cotransporters AT1G65550 45.701 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00826 - - gmx:100812585 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00826 4 10873866 10879356 Vian4g00826 4 10873866 10879356 ECH
Vian1g01164 1 12493614 12498816 Vian4g00826 4 10873866 10879356 PCT