Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01164 ATGGCAGGAGGTGGGGGAGCTCCGGCGCCTAAGATTGATGAGCCACAACCACATCCACCGAAGGATCAGCTTCCAAATGTTTCCTACTGCATTACCAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGGTTTCAACATTATATTGTGATGCTCGGTACAACTGTGCTAATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATTCAAACTCTACTCTTTGTAGCTGGAATTAACACATTGCTGCAGACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATGCTTATGTTGCAACAACCATCTCTATTATTCGTGATAGCCGTTACAGTGATGAGCCAGATCCCACAGAGCAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCATCAACTCTTCAAATAGTACTAGGTTTTAGTGGGCTTTGGCGTAATGTTGCAAGGTTCTTGAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTTTACGAGCTCGGCTTTCCTGGGGTTGCTAAATGTATAGAGATTGGACTGCCGCAGCTCATATTGCTAGTATTTGTTTCACAGTTTGTACCACATGTTCTACATGCAGGAAAACATGTCTTCGAACGGTTCACTGTTTTATTTACAATTGCAATTGTGTGGCTATATGCCTATCTGCTCACTGTTGGAGGGGCTTACAATCATGCTGCCCCTAAAACACAAGGAACTTGCCGTACTGATCGTGCTGGTTTAATAGAATCTGCCCCATGGATACATGTTCCATATCCATTTCAATGGGGAGCCCCTACATTTGATGCAGGTCAAGCATTTGCCATGATGATGGCATCCTTTGTTTCCCTCGTAGAGTCCAGTGGTGCTTTTATTGCTGTCTATCGGTATGCAAGTGCAACACCTTTACCACCATCTATTCTTAGTCGCGGAATCGGTTGGCAGGGAGTTGCCATTTTGTTATCGGGATTGTTTGGAACGGGAAATGGATCCTCTGTATCAGTAGAAAACGCTGGTCTTTTGGCTTTAACACGAGTAGGCAGCCGAAGGGTGGTGCAGATATCGGCTGGTTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCTGTTTTTGCGTCCATTCCACCTTCTATTGTTGCTGCACTGTACTGCTTGTTCTTCGCTTATGTTGGAGCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAATTTTTATACTAGGCTTCTCCATCTTCATTGGTCTGTCTGTGTCACAGTACTTCAATGAATACACAGCAATTAATGGTTATGGTCCAGTTCACACCAAAGCAAGATGGTTCAATGATATAATCAATGTCCCATTTCAATCAAAAGCATTTGTTGCGGGTTGCATGGCGTATTTCCTTGATAACACAATACATAAGAAGGAGGGTGCTATTCGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGCTCCTTCAAGACTGACACAAGAAGTGAGGAGTTTTATTCACTGCCTTTCAACCTAAACAAATACTTCCCATCTGTGTAA 1602 0.4388 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYAYVATTISIIRDSRYSDEPDPTEQFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPQLILLVFVSQFVPHVLHAGKHVFERFTVLFTIAIVWLYAYLLTVGGAYNHAAPKTQGTCRTDRAGLIESAPWIHVPYPFQWGAPTFDAGQAFAMMMASFVSLVESSGAFIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTIFILGFSIFIGLSVSQYFNEYTAINGYGPVHTKARWFNDIINVPFQSKAFVAGCMAYFLDNTIHKKEGAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01164 533 NCBIfam purine/pyrimidine permease 41 440 - -
Vian1g01164 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian1g01164 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 531 - -
Vian1g01164 533 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01164 Vian-Chr1 12493614 12498816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01164 9 533 Organic Solute Cotransporters AT5G49990 79.278 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01164 - - gmx:100791553 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01164 1 12493614 12498816 Vian4g00826 4 10873866 10879356 PCT