Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00825 ATGGGAAATTGCCAAGCCATCGATGCAGCAACACTGGTGATTCAGCACCCCAATGGGAAAGTAGACAAGTTTTATGCACCTGTGAGTGCCACACATGTAATGAAAACCAACCCTGGTCACTATGTTGCTCTTCTCATCTCCTCCACCACATTATGTCCAACCAAACACATTCAAAATTGCCCCAATCAGAGTGACCACAAAGCTAACACCAACACCAACACCAACATCAGCAACAACAACCCAGTTCGTTTAACTCGCATCAAGCTTCTCAAGCCCACCGACAACCTTCTTCTTGGTCAAGTTTATAGGCTCATCACAACAAAAGAGGTCATGAAGGGTCTCAGGGAAAAGCAAAAGGCAAAGATGAGGCAGAACGTGGTAGAGTCAGTTCACAAGCCAGATTTGGAGAAAGAGAAACTGCCAAGGAGGCCTGATATCGAGGACAATAAGGTAATGGCGAAACCTGAAAGAGGTCGAGCAAGGATAACAGCACCAACTAATAATGGTGGTGGTGCCACAGCTAAGACAAGATTATGGCAACCTTCTTTACAAAGTATCTCGGAGTCTGCCAGCTGA 576 0.4583 MGNCQAIDAATLVIQHPNGKVDKFYAPVSATHVMKTNPGHYVALLISSTTLCPTKHIQNCPNQSDHKANTNTNTNISNNNPVRLTRIKLLKPTDNLLLGQVYRLITTKEVMKGLREKQKAKMRQNVVESVHKPDLEKEKLPRRPDIEDNKVMAKPERGRARITAPTNNGGGATAKTRLWQPSLQSISESAS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00825 191 MobiDBLite consensus disorder prediction 166 191 - -
Vian4g00825 191 MobiDBLite consensus disorder prediction 122 157 - -
Vian4g00825 191 PANTHER EXPRESSED PROTEIN 1 189 - -
Vian4g00825 191 Pfam PADRE domain 1 188 IPR025322 -
Vian4g00825 191 MobiDBLite consensus disorder prediction 122 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00825 Vian-Chr4 10859399 10860337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00825 - - gmx:100813476 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00825 4 10859399 10860337 Vian4g00825 4 10859399 10860337 ECH
Vian1g01163 1 12483359 12484493 Vian4g00825 4 10859399 10860337 PCT