Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01163 ATGGGAAACTGTCAAGCCGTTGACACTGCAACTTTAGTCATACAACAACCCAATGGGAAAGTGGAAAGGTTGTATTGGCCTGTGAGTGCTAGTGAAGTCATGAAGACCAACCCTGATCACTATGTTGCTCTTCTTATCTCCACCACATTGTGCACATCCAAGGACAATCAAAATTGCCAAATTAAGATTGAAAACAACAACCCCAACACCACCAACCCTGTTCGTCTCACCCGCATCAAGCTTCTCAAGCCAACAGATACCCTTATGCTTGGCCAAGTTTATAGACTAATCTCAGCTCAAGAGGTTATGAAGGGTCTTTGGGCAAAGAAACAAGCAAAGCTGAAGAGAAACTTGCCAGAATCAGCACAAAAGCCAAATCTGACCAAGGAAAGGACAGACAAATCAGCAAGAAGGTCTGAGCCGGAGGACAACCTGGAAACGAAAGGTGAAAGACAGGGGTCAAGGACAGCATCAAGTAATAATGCTTCTGGTGCCACAGCTAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCTCAGAGGCAACCAGCTGA 555 0.4523 MGNCQAVDTATLVIQQPNGKVERLYWPVSASEVMKTNPDHYVALLISTTLCTSKDNQNCQIKIENNNPNTTNPVRLTRIKLLKPTDTLMLGQVYRLISAQEVMKGLWAKKQAKLKRNLPESAQKPNLTKERTDKSARRSEPEDNLETKGERQGSRTASSNNASGATAKSRTWQPSLQSISEATS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01163 184 Pfam PADRE domain 1 181 IPR025322 -
Vian1g01163 184 MobiDBLite consensus disorder prediction 114 184 - -
Vian1g01163 184 MobiDBLite consensus disorder prediction 151 184 - -
Vian1g01163 184 PANTHER EXPRESSED PROTEIN 1 183 - -
Vian1g01163 184 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01163 Vian-Chr1 12483359 12484493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01163 - - gmx:100500500 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01163 1 12483359 12484493 Vian1g01163 1 12483359 12484493 ECH
Vian1g01163 1 12483359 12484493 Vian4g00825 4 10859399 10860337 PCT