Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00419 ATGGACTATACCTTGGTGCATTATAATGTGAAGGCTTGGGAAGGGCGGGCCTATGACTACTGTATGGAAAACCTCAAGAAAATGGGTTTCCCTGTGGATGGACTTACATTTGATCCAGACCTGGTTATTAGAGGTCTTGTCATAGATAAAGAGAGAGGTAATTTGGTTAAAGCTGATCGATTCGGTTGTATAAAAAGAGCTATGCATGGAACCAAGCTGTTATCTACTCATGCTGTGAGGGAGATATATGGGAGAGAAATGGTGGACTTGCAGCAAGAGGGTCGATGGGTGTTTCTAAGCACATTCTTCTCCGTGTCGGAAGCTGTGGCTTACATGCAGATGGTTGACATGTTGGATGATGGGGTTATACCAGCCAATCTTGGACCCTTTGATTATAAAGGGCTTTATAAGGCTATGGGAATGGCCCTTCTCACGGCACATCTAGAAGGTCACCTCAAGAATGAGATTATGTCCAACCCTGAACAATTTGTGGAGCTTGATCCGGAATTGCCCTTGACACTTTTGGATCAAAAGGAGGCCGGAAAAAAGCTTGTGCTCATTACCAATTCAGATTATCATTATACAGACAAAATGATGCATTATTCCTTTAATAGATTCCTTCCTAGTGACATGGGTTGGCGAGATTTATTTGACATTATTGTTGTCTCGGCAAACAAACCAGAATTCTTCCAAATGTCACACCCCATGTATGAGCTGGTAACAGATGAGGGTTTGATGCGTCAATGCTTTAAGGCTCAAATTGGTGGTTTGTACTCAGGAGGGAGTGCAAAGATGGTTGAAAGTTCCCTGAATATACATGGAAATGATATACTTTACATTGGAGACCACATTTACACTGATGTTAACCAATCCAAAGTCCATTTGCAATGGCGAACAGCATTGATTTGTCGAGAATTGGAAGAAGAATATAATGCCTTAATTCATAGCCGAGGTTATAGACAATCACTGTTGGAGCTTATAAATCAAAAGGAAGTTGTTGGTGATATCTTTAACCAACTACAACTTACTCTACAGAGGCGAAGTAAAAGGCTTAATGCTCAAACCGTTGGTGCAACTGACATGGACAATGAAAACCTTAGTCAAAGCATGCAGAAATTACTTGCCGTCATGCAAATACTAGATGGAAAAATTGCTCCAATGCTAGAGGCATATGGGGCTCTCTTCAATAAAAGGTGGGGCTATCTATCACGTGGTGATTTTTGGGATAAAAGCCACTTAATGCGACAAATTGAGAAGTATGCAGATATATATACCTCTAGGGTGTCAAACTTTCTATATTACACACCCTTTATGTATTTCCGCTCACAGGAGCAGAACCTCGCACATGATCCATACACACACTATTGTTCTCAAGTGGATCAGTTTCCTTCCAATGGAAAATTGGACTAA 1410 0.4099 MDYTLVHYNVKAWEGRAYDYCMENLKKMGFPVDGLTFDPDLVIRGLVIDKERGNLVKADRFGCIKRAMHGTKLLSTHAVREIYGREMVDLQQEGRWVFLSTFFSVSEAVAYMQMVDMLDDGVIPANLGPFDYKGLYKAMGMALLTAHLEGHLKNEIMSNPEQFVELDPELPLTLLDQKEAGKKLVLITNSDYHYTDKMMHYSFNRFLPSDMGWRDLFDIIVVSANKPEFFQMSHPMYELVTDEGLMRQCFKAQIGGLYSGGSAKMVESSLNIHGNDILYIGDHIYTDVNQSKVHLQWRTALICRELEEEYNALIHSRGYRQSLLELINQKEVVGDIFNQLQLTLQRRSKRLNAQTVGATDMDNENLSQSMQKLLAVMQILDGKIAPMLEAYGALFNKRWGYLSRGDFWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDPYTHYCSQVDQFPSNGKLD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00419 469 Gene3D - 144 333 IPR023214 -
Vian4g00419 469 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 1 449 IPR008380 -
Vian4g00419 469 FunFam Haloacid dehalogenase hydrolase 142 333 - -
Vian4g00419 469 NCBIfam HAD-IG family 5'-nucleotidase 1 323 IPR008380 -
Vian4g00419 469 Pfam 5' nucleotidase family 1 450 IPR008380 -
Vian4g00419 469 SUPERFAMILY HAD-like 1 451 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00419 Vian-Chr4 4792221 4805096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00419 - - vun:114174902 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00413 1 3771100 3775602 Vian4g00419 4 4792221 4805096 PCT