Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00413 ATGTCATTTATCAAAAACTGGAGAGTGCTACTTAACTTTATATGCAATGGAAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGACTATACCAGCAGATCTTGGCCCTCTCGATTATAAAGGACTATATAAGGCTGTTGGAAAAGCTCTTTTCTGGGCACATGTAGAAGGTCGCCTTAAGAGCGAGATCATGTCTAAGCCTGAACTTTTTGTGGAGCCTGATCCAGAATTACCTTTGGCGCTTCTGGATCAGAAGGAGGCTGGTAAAAAACTTCTGCTAATTACCAACTCCGATTATCATTACACTGACAAAATGATGCGGCACTCTTTTAATAAATTCCTTCCCAATGATATGAGTTGGCGAGATCTATTTGACATTGTAATTGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACATCACACCCCATGTATGAAGTGGTCACAGACGAGGGGCTTATGCGTCCATGCTTCAAGGCTCAGACTGGTGGTTTGTATTCAGGGGGAAGTGCACAAATGGTTGAAAATTCTCTAGGTATTCATGGAGATGAGATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTCGAGAACTGGAAGAAGAGTACAATGCCTTGATTGGTAGCCGGAGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTAGTAGGGGATCTCTTTAACCAACTTCGGCTAGCTCTGCAGAGGCGAAGCAAAGACCGTCCTGCTCAGACCCTAGCAGCAACTAACATGAATGATGAAGACCTCACTGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATAAGAAAATTGCTCCAATGCTGGAGGCTGACGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCCGACATTTATACATCTAGGGTGTCAAACTTTTTGGATTATACGCCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCGTACACGTACTATTGTTCACAAATTAATAATGAGCATTCTTCCTAG 1212 0.4299 MSFIKNWRVLLNFICNGSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPADLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMRHSFNKFLPNDMSWRDLFDIVIVSARKPEFFQTSHPMYEVVTDEGLMRPCFKAQTGGLYSGGSAQMVENSLGIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGSRSYRESLVELINQKEVVGDLFNQLRLALQRRSKDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDKKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLDYTPFMYFRSQEQNLAHDSYTYYCSQINNEHSS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00413 403 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 18 388 IPR008380 -
Vian1g00413 403 Gene3D - 84 272 IPR023214 -
Vian1g00413 403 SUPERFAMILY HAD-like 19 390 IPR036412 -
Vian1g00413 403 Pfam 5' nucleotidase family 18 389 IPR008380 -
Vian1g00413 403 NCBIfam HAD-IG family 5'-nucleotidase 18 261 IPR008380 -
Vian1g00413 403 FunFam Haloacid dehalogenase hydrolase 80 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00413 Vian-Chr1 3771100 3775602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00413 - - vun:114174902 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00413 1 3771100 3775602 Vian1g00413 1 3771100 3775602 ECH
Vian1g00413 1 3771100 3775602 Vian4g00419 4 4792221 4805096 PCT