Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00418 ATGAAACAAGGGTCACCAGCATCACCACCACCACCATCACCACCACAACCACCCCCACCAACAAAAAATGTGATCAGGCTTCAGAGCAGTTTAACGCCATCAAGGTTAAGACTTCCTTCCAAGTACAGAGAGCCTCCAAGGACTCCACCAGAGGTTGTCAATGGAGTGGTGTCAACTCCAACTAGGAGAGCCCAGTCTGTCACTCCAGAGCTGAAGCACACTTCCAGGATCAAAAGGGGTCTAGTGCTGAACAAGGCCAAACCCAATGAAGAGGTTGCAGGAACCCACAGGGGTAGGGAAGCTGAAGAGGCTAAGGCTGTGTCTCGCTTCGTGCGGCCTCATGTTGTGGAACAGTTTGCTAGGCCAAGGAGTGCGGTTGGGGAATTTACTATGAAGAGGGATAAGGAGGACCCTGATGGAAAGAGTAAGAAGGAACTGATGGAGAAGCTTGAGGTGAGTGAGAGTTTGATCAAGAATCTGCAGTCTGAAGTTCTGGCTTTGAAGGCCGAGTTGGAAAAAGTTAAGGGCTTGAATGTGGAGCTGGAATCTCACAACAGAAAACTCACTAAGGATGTTGCTGCTGCTGAATCGAAGGTGATGTCTTTGGGTGGAAGTGAAAAGATGAAGGAGCCAATTGCAGAACATCAGAGCCCCAAATTTAAACACATTCAGAAACTCATTGCTGACAAATTAGAAAGGTCCATAGTGAAAAAGGAAGCCATTACTGATGGCTGCTTTGTTAAAGCCTCAACTCCAGCACCAACAGCAATTCCTACGATTCCTGAAGCTACAACTATAAGGGTAGGAAGAAAGCCTGCACTAAAAGCATGTCTGCCACCGCCTCCACCACCTCCACCACCGATGCCACCATCAATCCCTTCTAGGCCTGTAGCAAAAGTAAATAACACCCAAAAGGCCCCTGCATTTGTAAAATTACTTCACTCATTGAAGAATCAAGAAGAAATGAAGAACACAACAGGATCGGTTAAACAGCAGAAACCAGTTGCTGTGAATGTACATAGCAGCATTGTTGGAGAAATTCAAAACCGTTCTGCTCATCTATTAGCAATAAGGACAGACATTGAAACAAAAGGAAATTTTATCAATGACCTTATAGAAAAGGTGGTAGAAGCGGCCTACACGGACATTGAAGATGTCCTAAATTTTGTGAATTGGCTTGATGGTGAACTCTCATCATTGGCTGATGAGCGTGCAGTCTTGAAGCATTTTAATTGGCCTGAGAGAAAAGCTGATGCCATGCGTGAAGCCGCAGTTGAGTATCGCGAACTTAAATTGTTAGAACAAGAGATTTCCTCCTTCAAGGATGACCCTGAAATTCCATGTGGAGCTTCCTTGAGAAAGATGGCCACCCTATTAGATAAGTCTGAGTGCAGCATACAGAGACTAATCAAGCTGAGAAATTCTGTAATGCGTTCATATCAAGATTACAAAATTCCAACCGCTTGGATGCTTGACTCGGGAATCACGGAAAAGATTAAGCAGGCTTCTATGATTCTGGTCAAAATGTACATGAAAAGAGTGACAATGGAACTTGGATCTGCTAGGAATTCTGACAGACAGTCTAGTCAAGAATCCCTTCTGCTTCAGGGCGTCCATTTTGCATACAGAGCTCATCAGTTTGCTGGAGGTTTGGATGCAGAAACTCTGTGTGCTTTTGAAGAGATAAGGCAACATGTACCAGGACACTTAGCAGGGTCTCGAGAACTTTTGGCTGGCATAGCATCATCGTAA 1752 0.4498 MKQGSPASPPPPSPPQPPPPTKNVIRLQSSLTPSRLRLPSKYREPPRTPPEVVNGVVSTPTRRAQSVTPELKHTSRIKRGLVLNKAKPNEEVAGTHRGREAEEAKAVSRFVRPHVVEQFARPRSAVGEFTMKRDKEDPDGKSKKELMEKLEVSESLIKNLQSEVLALKAELEKVKGLNVELESHNRKLTKDVAAAESKVMSLGGSEKMKEPIAEHQSPKFKHIQKLIADKLERSIVKKEAITDGCFVKASTPAPTAIPTIPEATTIRVGRKPALKACLPPPPPPPPPMPPSIPSRPVAKVNNTQKAPAFVKLLHSLKNQEEMKNTTGSVKQQKPVAVNVHSSIVGEIQNRSAHLLAIRTDIETKGNFINDLIEKVVEAAYTDIEDVLNFVNWLDGELSSLADERAVLKHFNWPERKADAMREAAVEYRELKLLEQEISSFKDDPEIPCGASLRKMATLLDKSECSIQRLIKLRNSVMRSYQDYKIPTAWMLDSGITEKIKQASMILVKMYMKRVTMELGSARNSDRQSSQESLLLQGVHFAYRAHQFAGGLDAETLCAFEEIRQHVPGHLAGSRELLAGIASS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00418 583 Coils Coil 143 198 - -
Vian4g00418 583 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 8 568 IPR040265 -
Vian4g00418 583 MobiDBLite consensus disorder prediction 1 22 - -
Vian4g00418 583 MobiDBLite consensus disorder prediction 1 75 - -
Vian4g00418 583 Coils Coil 416 436 - -
Vian4g00418 583 MobiDBLite consensus disorder prediction 54 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00418 Vian-Chr4 4777908 4781095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00418 - - gmx:100820086 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00418 4 4777908 4781095 Vian4g00418 4 4777908 4781095 ECH
Vian1g00421 1 3884730 3888613 Vian4g00418 4 4777908 4781095 PCT