Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00421 ATGAAGCAAAAGACGCCGTCTTCACCAATCACTACAAGAACTGCGTTGAAGAAGCACGGTGACAACAACAAGTCCCTGCAGAGTCCACCGCAGCCACGCCTCAGAGCTTCTTCCAAGGCTCCAAAGTCACCACCAGAGACATCAACCAGAGCCAAGTCAGTGCCCCTGGACTTGAAGGACGTTTCGAGGGCCAAGAGGGGTGCTGCTGTGGGGTCTCGAAAGGGTAGGGAAGCTGAGGAGGCTGAGGTTGTTGTTGTTGCTCGGCCACGGCGAAGGCTTGGGGATTTCGGTTTGAGGAAGAGTGGAGATGATGACCCTGATGGGAAGAAGAGGAAGGAGTTGCAGGAGAAGCTCGAGGTGAGTGAAAATTTGATCAAGAGTTTGCAATCTGAGGTGCTGGCGTTGAAGGAGGAATTGGATAGAGTTAAGAGCTTGAATGTGGAGCTTGAGTCCCAGAACACAAAGCTCACTCGGAACCTTGCTGAAGCTAAGCAAGCAACTGTTGGGATTGGCAACAGTGGAAAGAAGGAGTCAGTAATAGGAGAACACCAGAGTCCCAAGTTTAAAGACATACAGAAACTCATTGCTGACAAATTGGAACTGTCTAGAGTGAAAAAGGAAGGTAATCCTGAAGTTAATTTTGCCAAAGCATCAATTCTTTCACCAACCAGAAGTTTTTCCATTCATGAAACTAAAAGTATAGGAAGAAAATCTCCACCCAATATATGCCTGCAGCCACCTCCACCACTACCACCACCAATTATAGGAAGAAATTCTGCACACAGCACATGCCTGCAACCCCCTCCGCCTCCTCCACCACCTCCAATTCCATCTCGGCCTTCAGCAAGATTATCTGACACCAAAAAGGGTGCTGCAATTGTTGAACTATTTCACTCGTTAAAGAGTAAAGATGGGAAGATAGACTCAAAAGGACCTGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTGGGAGAAATTCAAAACCGTTCAGCTCATCTGTTAGCCATAAGGACAGATATTGAAACAAAAGGAGAGTTCGTTAATGACCTCATAAAGAAAGTAGTAGATGCAGCATTCACGGATATTGAAGAGGTCTTAAAGTTTGTTAATTGGCTTGATGGAAAACTATCATCATTGGCTGATGAACGTGCTGTCTTGAAGCATTTTAAGTGGCCTGAGAAGAGAGCTGATGCATTGAGAGAGGCTGCAATTGAGTATCATGAACTCAAAATGCTAGAACAGGAAATCTCCTCCTACAAGGATGACCCTGATATTCCATGTGGAGCTGCCTTAAAAAAGATGGCCAGCCTATTAGACAAGTCTGAGAGGAGAATACAGAGGCTAATAAAGCTAAGGAGTTCAGTCATACATTCATATCAAGTGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAGCAATATAAAGCAGGCTTCCATGACCCTTGTCAAGATGTACATGAAAAGAGTGACAATCGAGCTTGAATCCGTTCGCAATTCCGACAGAGAATCTATTCAAGATTCTCTTCTGCTTCAGGGTGTGCATTTTGCATACAGAGCCCATCAGTTTGCTGGAGGATTGGACTCAGAAACAATGTGTTGTTTTGAAGAGATACGGCAACGTGTACCAGGACACCTAGCAGGGTCTCGAGAACTTTTGGCTGGCATACCATTATCATGGTAA 1707 0.4499 MKQKTPSSPITTRTALKKHGDNNKSLQSPPQPRLRASSKAPKSPPETSTRAKSVPLDLKDVSRAKRGAAVGSRKGREAEEAEVVVVARPRRRLGDFGLRKSGDDDPDGKKRKELQEKLEVSENLIKSLQSEVLALKEELDRVKSLNVELESQNTKLTRNLAEAKQATVGIGNSGKKESVIGEHQSPKFKDIQKLIADKLELSRVKKEGNPEVNFAKASILSPTRSFSIHETKSIGRKSPPNICLQPPPPLPPPIIGRNSAHSTCLQPPPPPPPPPIPSRPSARLSDTKKGAAIVELFHSLKSKDGKIDSKGPVNHQRPVVISAHSSIVGEIQNRSAHLLAIRTDIETKGEFVNDLIKKVVDAAFTDIEEVLKFVNWLDGKLSSLADERAVLKHFKWPEKRADALREAAIEYHELKMLEQEISSYKDDPDIPCGAALKKMASLLDKSERRIQRLIKLRSSVIHSYQVYNIPTAWMLDSGIMSNIKQASMTLVKMYMKRVTIELESVRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDSETMCCFEEIRQRVPGHLAGSRELLAGIPLSW 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00421 568 MobiDBLite consensus disorder prediction 264 280 - -
Vian1g00421 568 MobiDBLite consensus disorder prediction 251 285 - -
Vian1g00421 568 MobiDBLite consensus disorder prediction 56 110 - -
Vian1g00421 568 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 17 552 IPR040265 -
Vian1g00421 568 Coils Coil 436 456 - -
Vian1g00421 568 MobiDBLite consensus disorder prediction 1 34 - -
Vian1g00421 568 Coils Coil 111 166 - -
Vian1g00421 568 MobiDBLite consensus disorder prediction 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00421 Vian-Chr1 3884730 3888613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00421 - - gmx:100820135 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00421 1 3884730 3888613 Vian1g00421 1 3884730 3888613 ECH
Vian1g00421 1 3884730 3888613 Vian4g00418 4 4777908 4781095 PCT