Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00414 ATGGAAGAAGTTAACGTGGTTCAAACGAAGGATGGAACTGTTACAGTAGCTTCTGTGTTTCCTGGACATCAGGAAGCTATACAGCAGAGAGACCACAAGTTCTTGAGAATTGCAGTTGAAGAAGCTTATAAAGGAGTAGAGTGTGGAGATGGTGGTCCTTTTGGTGTTATAATAGTTCGTAACGATGAAGTAGTTTCTTGCTGTCACAACATGGTGCTCAGGAACACAGATCCTACTGCTCATGCAGAAGTCACTGCTATAAGAAAGAGGTTGGTTTATGGAGCGAAAGCAGAGGCAGCAATTGCTGTTGGGTTCGATGACTTCATTTCAGATGCATTGAGAGGTACTGGATTCTATCAGAAAGCACAATTGGAGATTAAAAGGGTTGATGGAAAAGAAGATGAGATTGAAAAGAAAGATACAATTTGA 429 0.4103 MEEVNVVQTKDGTVTVASVFPGHQEAIQQRDHKFLRIAVEEAYKGVECGDGGPFGVIIVRNDEVVSCCHNMVLRNTDPTAHAEVTAIRKRLVYGAKAEAAIAVGFDDFISDALRGTGFYQKAQLEIKRVDGKEDEIEKKDTI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00414 142 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 142 IPR002125 -
Vian4g00414 142 SUPERFAMILY Cytidine deaminase-like 24 90 IPR016193 GO:0003824
Vian4g00414 142 Gene3D Cytidine Deaminase, domain 2 22 89 - -
Vian4g00414 142 Coils Coil 119 139 - -
Vian4g00414 142 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 24 91 - -
Vian4g00414 142 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 93 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00414 Vian-Chr4 4733944 4735365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00414 - - gmx:100527067 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00429 1 3958122 3960677 Vian4g00414 4 4733944 4735365 PCT