Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00401 ATGGCTCGTATGTTAGGCTATGAACCTTGTTCCCATTCAAGTAGGGCCTTATTCAATTACTCTTCTATTTCTTCCCCTGAGGCTAACAGAAGACTTGGATTCACTTTTAGAGCTTGTTCTGATGCCAATGCTGGTGATAATTCTAAGAGGGTTTTCGTGAAGGAAAAGAAAAAGCTTTATGGTTTTGCATGTCTTCCTCACCCACCCTTGTTAGGTAATTTTGAGGAAGGTATTTCTGTTGAAGATTGGTCTTTGGGTGGAAGTCCCTCCAAACCTTTTTGTTTTCCTGATCAACCCTTACTCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGTATTAGGAAACTTTGTGTCAGCTCTGAACGAGTTCATAGCAGATCGATACTCATCAATTCATTCAGTTTCTGAGTATCATGTGTATGAGTTCTTCAAGATATGGAACTGTTCACGTGACGAAGCGAATACTCGTGTTCATGAATTTTTTGAGACATCATATTTCAAGTCAGGGATCCAACCTATCCCAGGTGCTCAGGTGGCGCTGCGGAAGTTATCAAGATTTTGTAACCTATCAGTTGTAACATCTCGGCAAAATGTGATCAAGGATCACACAATTGAGTGGATAGAGAAGCACTTTTCAGGACTGTTTCAGGATATTCACTTTGGAAACCACTTTGCTCTTGATGGGGTGTCCAGACCAAAGTCAGATATTTGTAGGTCTTTAAATGCAAATATTCTCATTGATGATAACCCAAGATATGCCATAGAGTGTGCTGAAGCCGGAATTAGAGTCCTACTCTTTGATTATGAAAACTCATACCCTTGGTCCAAGACTGACTCTGCTGATCAGCATCCCCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTTGAACAACAATTAATGTCATTGATAGCTTTATAG 921 0.4028 MARMLGYEPCSHSSRALFNYSSISSPEANRRLGFTFRACSDANAGDNSKRVFVKEKKKLYGFACLPHPPLLGNFEEGISVEDWSLGGSPSKPFCFPDQPLLQKLVVAVDVDEVLGNFVSALNEFIADRYSSIHSVSEYHVYEFFKIWNCSRDEANTRVHEFFETSYFKSGIQPIPGAQVALRKLSRFCNLSVVTSRQNVIKDHTIEWIEKHFSGLFQDIHFGNHFALDGVSRPKSDICRSLNANILIDDNPRYAIECAEAGIRVLLFDYENSYPWSKTDSADQHPLVTKVKNWEEVEQQLMSLIAL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00401 306 PANTHER NUCLEOTIDASE YQFW-RELATED 31 304 - -
Vian4g00401 306 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 104 299 IPR010708 GO:0008253|GO:0009264
Vian4g00401 306 Gene3D - 154 303 IPR023214 -
Vian4g00401 306 SUPERFAMILY HAD-like 105 301 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00401 Vian-Chr4 4605912 4609142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00401 - - gmx:100810501 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00401 4 4605912 4609142 Vian4g00401 4 4605912 4609142 ECH
Vian1g00450 1 4150068 4153050 Vian4g00401 4 4605912 4609142 PCT