Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00450 ATGTTTAGATTAAAGAACTGTGAAGGCCCTGTGCGGTTCTTGTATCAGCAAGCTCGGCATCACCCTCACCATAACAATCTCATGGCTTATTTAGTAGGTTTCGATCCTTGCTCCCACTTGAGTAGGGCCTTTTCGCAGTACCCTTCTCTCTCTTCTTCTGATCGTGGCTGCTATTTGTCTTTCCCACTTCTCCATAAACTTGTTTATGCAAATGTTTTTGGGGTTAGAAGAAGCATTGGTTTTGGTCGTAGAGGTTGTGGCTTTGATACTAGTGGTAGTTGTAGTGGTAATGGTGATAGGATCTTTGTGAAGGCTAAGGCAAGGTCCCGTGGCTTTGCATCGAATCGTCGCCAGCCGATGTTGGCTGATTTGGAGAAAAGGAATTCTGTTAAGAGTGATGAATCTGATGCTACTTTGGTTAAGATTGATGATAGATCTATAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCACCGATTGTCCCAGAAACTTGTTGTTGCCGTTGATGTTGATGAGGTATTAGGAAACTTCGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCACGTGTACGAGTTTTGTAAGATATGGAATTGTTCACGTGATGAAGCTGACATCCGTGTACATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCATACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGCAATTAAGGATCACACAATCGAGTGGATAGAGAAAAATTTTCCTGGACTGTTCCATGAGATTCACTTTGGTAATCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATCGATGATAACCCTCGATATGCCATAGAGTGTGCTAATGTTGGAATTAGAGTCCTGCTTTTTGATTATGAAAATTCATATCCTTGGTGCAAGAGCGAGTCAACGGAAGAACACCCTCTGGTGACCAAAGTAAAGAACTGGGACGAAGTTGAACAACAATTAATGTCATTGATTGCCTCTTAG 1107 0.4119 MFRLKNCEGPVRFLYQQARHHPHHNNLMAYLVGFDPCSHLSRAFSQYPSLSSSDRGCYLSFPLLHKLVYANVFGVRRSIGFGRRGCGFDTSGSCSGNGDRIFVKAKARSRGFASNRRQPMLADLEKRNSVKSDESDATLVKIDDRSINGSPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNAIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECANVGIRVLLFDYENSYPWCKSESTEEHPLVTKVKNWDEVEQQLMSLIAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00450 368 SUPERFAMILY HAD-like 159 363 IPR036412 -
Vian1g00450 368 PANTHER NUCLEOTIDASE YQFW-RELATED 75 367 - -
Vian1g00450 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 362 IPR010708 GO:0008253|GO:0009264
Vian1g00450 368 Gene3D - 202 365 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00450 Vian-Chr1 4150068 4153050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00450 - - gmx:100793947 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00450 1 4150068 4153050 Vian1g00450 1 4150068 4153050 ECH
Vian1g00450 1 4150068 4153050 Vian4g00401 4 4605912 4609142 PCT