Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00356 ATGATGCCTGTTATTAGCAAAATGTACTGTTCATCTTCTCAGAAGGTGCTTGGGGTCAGAAGAAGGCCACATGTGGTGAATGGAGGGGGATTTGTAGTCACGGATTGTAGTGCCCAAAGGGTTGTTTTCAAGGTTGATGGCTGTGGAATTCATGGCACAAAGGAACAGTTGATTCTAAGAGATGGTGAAGGAGATGCTTTACTTCTCATGCGTCGAAAGGGAGGCATGGTTGAGGCCCTTAGCATTTACAAGAAGTGGAAAGGATATAGCATGAACTATGAAGGATCACAGACCCTGGTTTTCAGCTTGAAAGAACCGAATTCTTGTTTTGTCAGGAACAATGGGATTAGAATCTCCATTGAGCCTAGAGGTTCAAGTAACAAAGGCTGGGACTTTGAGATCAGGGGTTACTTCCCTGATAGGAATTGTAGCATTGTTGACATTAGGGGCAACGTTATTGCCCAGGTTGGGGTGAATAAAGAAGTGGAGAAATTGATGGAAACCAAGGATCTGTACAATGTGGTCGTGAAACCTGGGATGGATCAAGCCTTTGTTTTTGGAGTCATCGCAGTTCTTGACTACATTTATGGAGAATCCACCTACTGCTAA 609 0.4384 MMPVISKMYCSSSQKVLGVRRRPHVVNGGGFVVTDCSAQRVVFKVDGCGIHGTKEQLILRDGEGDALLLMRRKGGMVEALSIYKKWKGYSMNYEGSQTLVFSLKEPNSCFVRNNGIRISIEPRGSSNKGWDFEIRGYFPDRNCSIVDIRGNVIAQVGVNKEVEKLMETKDLYNVVVKPGMDQAFVFGVIAVLDYIYGESTYC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00356 202 Gene3D - 3 200 IPR038595 -
Vian4g00356 202 Pfam LURP-one-related 4 191 IPR007612 -
Vian4g00356 202 SUPERFAMILY Tubby C-terminal domain-like 2 196 IPR025659 -
Vian4g00356 202 PANTHER - 16 197 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00356 Vian-Chr4 3993424 3994533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00356 - - gmx:100817988 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00356 4 3993424 3994533 Vian4g00356 4 3993424 3994533 ECH
Vian1g00492 1 4652372 4653156 Vian4g00356 4 3993424 3994533 PCT