Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00492 ATGACTACGAACGCAAGCACGATGCCGATCGTTGGCAAACTGTACTGTTCATCGTCTCAGACGGTGCATGTGGTGAGGAAGAGGCCACACGTGGTGAATGGTGGTGGTTTTGTGGTGATGGATTCTAGTGCCCAGAGGGTTATGTTCAGGGTCGATGGTTGTGGTGTTCGTGGCAAAAAGGGAGACTTGATCCTAAGAGAAGGAGATGGAGACGCTTTGCTTCTAATGCTTCGGAAGGGAGGCATAGTGGAGGCCTTGAGCATTTACAAGAAGTGGAAAGGTTACAGTTTAGACTACGAAGGATCACGGAAGCTGGTTTTCAGCTTGAGAGAACCGAATTCTTGTTTGTTTAAGAACAAGGCAATCAGAATCTCCACTAGGAACAGAGGCTGTGATTTTAAGATCAGTGGCTATTTCCCGGACAAGTGTTGTAGCATTGTTGACTCGAAAGGCAACGAGGTAGCACAGGTGAGGGTGATGAAGGAAGTGGAGGAGTTGATCCAAAACAAGGATTTGTATCATGTGGTGGTGAAAGCTGGGATGGATCAAGCTTTTGTTTTTGGAGTCATAGCTATTCTTGATCACATTTATGGAGAATCTACCCACTGCTAA 612 0.4624 MTTNASTMPIVGKLYCSSSQTVHVVRKRPHVVNGGGFVVMDSSAQRVMFRVDGCGVRGKKGDLILREGDGDALLLMLRKGGIVEALSIYKKWKGYSLDYEGSRKLVFSLREPNSCLFKNKAIRISTRNRGCDFKISGYFPDKCCSIVDSKGNEVAQVRVMKEVEELIQNKDLYHVVVKAGMDQAFVFGVIAILDHIYGESTHC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00492 203 PANTHER - 22 198 IPR007612 -
Vian1g00492 203 Pfam LURP-one-related 10 192 IPR007612 -
Vian1g00492 203 SUPERFAMILY Tubby C-terminal domain-like 8 197 IPR025659 -
Vian1g00492 203 Gene3D - 8 201 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00492 Vian-Chr1 4652372 4653156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00492 - - gmx:100306504 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00492 1 4652372 4653156 Vian1g00492 1 4652372 4653156 ECH
Vian1g00492 1 4652372 4653156 Vian4g00356 4 3993424 3994533 PCT