Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00349 ATGGTTCAGACCAAAACCACTCCGAACCCCTCTAAAGCCGACGCCATCCACCCACTCACGCCGGCAAAAACCCACGAACCTTCATCCGTTTCTACCTCTCTCCCTTTCCCCCGCCGCAGCCTCCGTCTCGCCTCTCTCTCCGACGCCTCCCCCGCCGCTAGGGTTTCCGCCGCCTCCAACCGCCAGACCTTTCTCAACTTAAGATCGGGAAAGAGGGTTCTCAAGAGAGCGATGACAGACGACGCAGAGGAACAAGGCAATGACGCAAACGATGAAACTGATCATGTTGCAGTGGCGGTTGATGTCAATGTCACCGCGCCAGAAACTACAACTACGGAAAACTCAGCCGTCAATGTCAATGTTGTAGCAGATGATTCCGGTGTTGGGGTTTCCACCCGGAGCCGGAAGCGCAATAGAGACTCAACCGGTTTCGAACACGAGGAGTTTCTCTACTTAAGGTCGGGAAAGAAGACTTTAAAGAGAACACTCAATTTCTATTCCAGAGAACAAGTTATTAACGCAGATGATGATGATGCTGATAATGATGACGACGACGATGGTGGTGTGGCAGTGGCGGTTGATGGTGACGTGACAACACCGGAATCCAGAACGGAGAACTCCTGTGTGAATAATGCACCTGCGCGAGTTCGAGAGCGTTCTAGAAACTCCAATGCAACGGAGCGCCGTTCCGGTTTGAGGAGGAACGATCATATGGAGCGCTTTCACGACATTGCGCGGGAAAACGCGTCACGGTTTGCGTTCTTCGCACCGGAAGAGGAAGATGGTGACCGGTTGCCGCCGGTTCCCGAAGCGGCGCGTGAGGAAATTGAGGACTGGCCCGGTCCTTTCTCCACGGCTATGAAAATCATCAGAGACCGAGGGATGAATGTTCAGAACGCTCAAACAAGTTCGCAGACGAACTTGTGTGAATCTATTAAGTGGGTTCCCAATGCGAAGAAAGGGGATTTGGGCATTTTATCGGTTCCTTCGTTGCAAGATATGTGCTTTAAGATTCTTGTGAAGAATGTGGACGCGATTGCATCGCTCGAGAGTGTGCCTGATGCGCTGAGGCACCGGCTTAGTCAGTTGCTCTGTGACTCGAGGAGAATTAACGGTCACTTTCTGGAGCTTCTTGTGCGTGGAACTCCCACGGAGATTCGGTTAAGGGACTGCTCGTGGTTGACTGAGGAACAGTTTACGGAGTGTTTTCGAATGTGTAACACGGAGAATTTGTTGGTACTGCAACTTGACCAGTGTGGGCGATGTTTGCCTGATTTTGTAGTAGTTGCGACTTTGGCACGGTCACCTAGGAATTTGGTTAGATTAACTACTCTATCACTCCGTGGTGCATGCCGACTTTCAGATGGAGGTTTACGTGCGCTCGTTTCTTCAGCTCCTGCTCTTAGATCGATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATATTTTGGCTGAATCATTAAGACATCTTCTGAAAGAGTTGTTCCTTGATGATTGCCAATGCATTGATGCTGCACTAATCGTGCCAGCACTAATTGAGCTTGAACATTTAGAAGTGTTGTCAGTGGCTGGTATTCAAACTGTGTGTGATGAATTTGTCAAGAATTACATTGTTGCACGTGGCCAAAACATGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACCGATTCATCAATCAAAGTTATTGTTGAGCATTGTCCGGGATTGCAGGTGCTTGATCTTATGAACCTGAACAGATTAACAGATTTATCCGTTGGATATCTTACCAATAGTTGCCGCGTACTTCATACCCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCACTTGCTGCATTTGTGGAAACCACAGGAGGGTCCCTGAAGGAACTGTCACTTAATAACATCAAGAAGGTTGGTTACCACACAACCTTATCACTTGCAAACCATGCGAAAAATCTGCACTCTCTAGATTTATCTTGGTGCAGAAATTTGACAGACAATGCACTGGGTTTGATTGTGGATAGCTGCTTGGCCCTGAGGTTACTCAAACTTTTTGGATTGACTCAGGTAACAGATGCATTTCTTAATGGTCACTCAAACCTACAGATGCAGATAATTGGTTTAAAAATGTCTCCGGTTTTAGAACATGTCAAAGTTCCAGATCCTCATCAGGGTGCTTTGAATTATTCATCAGTCACTTGGGATTTGGTATAA 2211 0.4735 MVQTKTTPNPSKADAIHPLTPAKTHEPSSVSTSLPFPRRSLRLASLSDASPAARVSAASNRQTFLNLRSGKRVLKRAMTDDAEEQGNDANDETDHVAVAVDVNVTAPETTTTENSAVNVNVVADDSGVGVSTRSRKRNRDSTGFEHEEFLYLRSGKKTLKRTLNFYSREQVINADDDDADNDDDDDGGVAVAVDGDVTTPESRTENSCVNNAPARVRERSRNSNATERRSGLRRNDHMERFHDIARENASRFAFFAPEEEDGDRLPPVPEAAREEIEDWPGPFSTAMKIIRDRGMNVQNAQTSSQTNLCESIKWVPNAKKGDLGILSVPSLQDMCFKILVKNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRMCNTENLLVLQLDQCGRCLPDFVVVATLARSPRNLVRLTTLSLRGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASIYILAESLRHLLKELFLDDCQCIDAALIVPALIELEHLEVLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDSSIKVIVEHCPGLQVLDLMNLNRLTDLSVGYLTNSCRVLHTLKLCRNPFSDEALAAFVETTGGSLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRLLKLFGLTQVTDAFLNGHSNLQMQIIGLKMSPVLEHVKVPDPHQGALNYSSVTWDLV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00349 736 MobiDBLite consensus disorder prediction 220 235 - -
Vian4g00349 736 MobiDBLite consensus disorder prediction 199 219 - -
Vian4g00349 736 Gene3D Ribonuclease Inhibitor 541 615 IPR032675 -
Vian4g00349 736 FunFam RNI-like superfamily protein 324 539 - -
Vian4g00349 736 SMART LRR_CC_2 439 464 IPR006553 -
Vian4g00349 736 SMART LRR_CC_2 597 621 IPR006553 -
Vian4g00349 736 SMART LRR_CC_2 545 570 IPR006553 -
Vian4g00349 736 SMART LRR_CC_2 649 674 IPR006553 -
Vian4g00349 736 SMART LRR_CC_2 465 490 IPR006553 -
Vian4g00349 736 SMART LRR_CC_2 571 596 IPR006553 -
Vian4g00349 736 SUPERFAMILY RNI-like 386 691 - -
Vian4g00349 736 Gene3D Ribonuclease Inhibitor 298 540 IPR032675 -
Vian4g00349 736 Gene3D Ribonuclease Inhibitor 623 717 IPR032675 -
Vian4g00349 736 FunFam F-box/LRR protein 544 721 - -
Vian4g00349 736 MobiDBLite consensus disorder prediction 1 35 - -
Vian4g00349 736 PANTHER UNCHARACTERIZED 357 702 - -
Vian4g00349 736 MobiDBLite consensus disorder prediction 196 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00349 Vian-Chr4 3908837 3913672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00349 K15082 - gmx:100808150 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00349 4 3908837 3913672 Vian4g00349 4 3908837 3913672 ECH
Vian1g00503 1 4771430 4775460 Vian4g00349 4 3908837 3913672 PCT