Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00348 ATGGCGCACAATAGCAGCAACAGCACCGCGGCCGTGGATGGCGGTCGAGTCAACAGCCCACGTTACCTCGGCTCAATGACTCGCCGAGCCCATTCGTTCAAACGCAAGAACAACAACCATGAAATTGAGCTTCAAATCAACTCGCCCAGATCCCCCTTGGCTCCTGCTGAAGGGTCTGTTTTGAAAAGGAATAATATTCACCATCATCATGTGAGCCACAAGGAGAAAAGGAACAAGTTTGGGCACTGGGTGTTTTTTCTCTTCTGTGGGGTGTGCTTTTTTGTGGGTCTTCTCAAGATTTGTGCCACTGCCTGGTGGTTCCGATCTTCAGTACACAGTACACGTGAATCCGTTCAGGAACTGTCTGACTCCATTAATAATCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCACATAGGGAGGGAGCAAATGAGGCTGAAAGAACTCTAAAGATTGTAACTGCGGGAATGATTGACAGTCACAGTGACATGGCTGAAGAATCAGGAATCTGGTCTAATCCCAACTATGAGAATTTCACCCAGTGTATAGACCTGTCAAGAAATCATAAAAAGCTTGATGCGAAGACCAATGGCTACATTCTTGTTAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACGCTTGTTCTTCCTTCTCTTGATCACACTTCGTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATCGAGACACTGAAGGATGATGTCCAAGTAGTTGAGACATTACCACCTGCATATGCTGAAATTGAACCTTTCTCCAAAACTCCTATATCTTGGTCTAAGGCCAGTTATTACAAGAATGAGGTTCTTCCTGTACTAAAGCAGCACAAAGTGATCTATTTCACCCATTCTGATTCCAGGCTTGCTAATAATGGAATACCAAGCTCAATACAAAAACTAAGATGTCGTGTAAATTATAGAGCACTGAAATATTCCTCTCCAATTGAAGAATTTGGAAACAAATTAATATCCAGAATGCGACAGAATGACAGTCCTTATCTTGCGCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAGGAAGATGAAGAACTACGGCAGATGCGATACGAAGTTGGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGGCAGGGGGTTGTCCATTAACTCCCAGGGAAACTTCCCTATTGCTCAGAGCACTAGGTTTTCCATCACAAACCAGGATTTATTTGGTAGCCGGCGAATCGTATGGTAGAGGAAGTATGAAATACCTTGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCAAAGAAGAGTTGAATCCTTATAAGAATCACCAGAACATGTTAGCTGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTATACTTATGATGGGAATATGGCAAAAGCAGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGGCAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAAATTTCTTGGGAGAAGTTCAGGTCCAAGGTAAAAATACTTCACAAAGACCGAATGGGTGCTCCATATGTTAGGGAACGTGGAGAATTTCCTAAGCTGGAGGAAAGTTTTTATGCAAATCCTATGCCAGGATGTATATGTGAAACAAAAACAAGATTAGAGACCTCACAGTAG 1791 0.4216 MAHNSSNSTAAVDGGRVNSPRYLGSMTRRAHSFKRKNNNHEIELQINSPRSPLAPAEGSVLKRNNIHHHHVSHKEKRNKFGHWVFFLFCGVCFFVGLLKICATAWWFRSSVHSTRESVQELSDSINNRNLMDQSSHGYAHREGANEAERTLKIVTAGMIDSHSDMAEESGIWSNPNYENFTQCIDLSRNHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDVQVVETLPPAYAEIEPFSKTPISWSKASYYKNEVLPVLKQHKVIYFTHSDSRLANNGIPSSIQKLRCRVNYRALKYSSPIEEFGNKLISRMRQNDSPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLAGGCPLTPRETSLLLRALGFPSQTRIYLVAGESYGRGSMKYLEDDFPNIFSHSSLSSKEELNPYKNHQNMLAGIDYIVALQSDIFLYTYDGNMAKAVQGHRRFENFKKTINPDKANFVKLVDKLDEGKISWEKFRSKVKILHKDRMGAPYVRERGEFPKLEESFYANPMPGCICETKTRLETSQ 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00348 596 CDD O-FucT_plant 200 521 IPR024709 -
Vian4g00348 596 FunFam O-fucosyltransferase 28 331 525 - -
Vian4g00348 596 Pfam GDP-fucose protein O-fucosyltransferase 200 515 IPR019378 -
Vian4g00348 596 PIRSF UCP009360 47 590 IPR024709 -
Vian4g00348 596 PANTHER OS02G0726500 PROTEIN-RELATED 76 587 - -
Vian4g00348 596 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00348 Vian-Chr4 3902662 3906452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00348 86 586 Miscellaneous Gene Families AT2G37980 57.364 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00348 - - gmx:100807090 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00348 4 3902662 3906452 Vian4g00348 4 3902662 3906452 ECH
Vian1g00505 1 4785778 4792981 Vian4g00348 4 3902662 3906452 PCT