Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00505 ATGGCGATATTCTCCGAATCGAATCACCATCACAACGCTTCCGATGGGGTGTCCCAGCGAGTCAACAGCCCGCGGTTCTCCGGCCCAATGACTCGCCGCGCCCACTCCTTCAAGCGCAACACTGACGGCGCCAACTCCAACGGCGGCTCCGGTGAGGTTGAGCTCCAAATCAACTCGCCCAGATCGGAAGAGGCGTCGGAGGGTGTTCCAGTGGGGAGGCACAGTCACAATCACGTGACCCAGAGAGTGCATGTGAGGGGGCTGTTGAAGAAGCCCCTTGCTTCCATCGTTGAGGATTTGGGGTTTAGGGAAAAGAAGAAAATTGGGCACTTGATGTTCTTGGCGTTCTGTGGGTTGTGCATCTTCATTGGTGTTCTCAAGATATGTGCCACTGGCTGGCTTGGATCTGCCATTGAAAGAGCTCAATCAGATAAGGAACTGCCTGACTCCATTGCTAGTCTAAATCTAATGGACAAAAGCTCCCTTGGTTATGCATATAGGGGGGGAGCAAGTGATGTTGAACGAACATTAAAAACATTAGCAACGGGAGTAGGTGGCAGCCATACTGCCATGGCTGAAGATCCAGGGATCTGGTCTAAGCCCAACAGTGACAATTTCACCCAATGCATAGATCTTCCAAGTAATCGTAAAAAGCTAGATGCAAAGGTCAACGGCTACATTCTAGTAAATGCAAATGGTGGTCTGAATCAGATGAGATTTGGGATATGCGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACGCTTGTTCTTCCTTCTCTTGATCACACCTCCTATTGGGCTGATGATAGTGGCTTCAAGGATTTGTTTGATTGGAAGTATTTTATTCATATGCTGAAGGATGATGTACACATAGTTGAGAAATTACCTCATGCTTATGCTGGAATTGAGCCTTTCCCAAAAACTCCAATATCTTGGTCCAAGGTTCCTTATTATAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATCTATTTCACTCATACCGATTCCAGGCTTGCCAATAATGACATTCCACATTCCATACAGAAACTAAGATGCCGTGTAAATTACAGAGCACTGAAGTATTCAGCTCCAATTGAGGAATTTGGAAACACGCTAGTATCTAGGATGCAACAGAATGGAAGTTCGTATCTTGCCCTTCATTTGAGATATGAGAAGGATATGCTTGCATTTACAGGATGCAGTCATAATTTGACTGCAGAAGAAGATGAAGAACTGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGCTAGGAGGTTGTCCATTAACTCCAAGGGAAACTTCCCTATTGCTTAAAGCATTGGGTTTTCCATCACACACCAGGATTTATCTAGTAGCTGGAGATGCATTTGGAAGAGGGAGTATGAAATATCTCAAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCCGGTATAGACTATGTTGTCGCCCTAAAGAGTGACGTTTTTCTTTACACTTATGATGGAAATATGGCAAAGGCGGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGATGAATTTTGTTAATCTTGTTGATCAGTTGGATGAAGGAAAATTTTCATGGAAAAAGTTTAGCTCCAAGGTCAAAAAACTGCACGAAGACCGAATTGGTGCTCCATACCGAAGGGAACCTGGAGAATTTCCAAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1848 0.4437 MAIFSESNHHHNASDGVSQRVNSPRFSGPMTRRAHSFKRNTDGANSNGGSGEVELQINSPRSEEASEGVPVGRHSHNHVTQRVHVRGLLKKPLASIVEDLGFREKKKIGHLMFLAFCGLCIFIGVLKICATGWLGSAIERAQSDKELPDSIASLNLMDKSSLGYAYRGGASDVERTLKTLATGVGGSHTAMAEDPGIWSKPNSDNFTQCIDLPSNRKKLDAKVNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADDSGFKDLFDWKYFIHMLKDDVHIVEKLPHAYAGIEPFPKTPISWSKVPYYKTEVLPLLKQHKVIYFTHTDSRLANNDIPHSIQKLRCRVNYRALKYSAPIEEFGNTLVSRMQQNGSSYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLKALGFPSHTRIYLVAGDAFGRGSMKYLKDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYVVALKSDVFLYTYDGNMAKAVQGHRRFENFKKTINPDKMNFVNLVDQLDEGKFSWKKFSSKVKKLHEDRIGAPYRREPGEFPKLEESFYANPLPGCICETR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00505 615 MobiDBLite consensus disorder prediction 1 26 - -
Vian1g00505 615 Pfam GDP-fucose protein O-fucosyltransferase 226 541 IPR019378 -
Vian1g00505 615 MobiDBLite consensus disorder prediction 1 54 - -
Vian1g00505 615 PANTHER OS02G0726500 PROTEIN-RELATED 104 613 - -
Vian1g00505 615 CDD O-FucT_plant 226 547 IPR024709 -
Vian1g00505 615 MobiDBLite consensus disorder prediction 40 54 - -
Vian1g00505 615 FunFam O-fucosyltransferase 28 357 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00505 Vian-Chr1 4785778 4792981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00505 154 612 Miscellaneous Gene Families AT2G37980 61.456 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00505 - - gmx:100801100 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00505 1 4785778 4792981 Vian1g00505 1 4785778 4792981 ECH
Vian1g00505 1 4785778 4792981 Vian4g00348 4 3902662 3906452 PCT