Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00337 ATGGCTTCCACTTCTGCACTTTCAATGGCTATGCCGGTAACTTGTGCCAGCCACAAGAAGGTCGTTCCTACCTCTGATGCCTTCTTCAAGCCACTGCCTCTACGGTCTTCAAAGGCACTGACAGCATCAAATCCCAATGGAAGGTTTCAAGTGAGAGCCTCCATGAAGGAGAAAGTTGTCACAGGGCTCACAGCAGCTGCATTGACGGCTTCAATGATGGCTCCTGATGTGGCTGAGGCTGCTGTCTCACCTTCTCTCAAGAACTTTTTGCTCAGCATCGCCGCCGGTGGAGTTGTTGTTGTGGCCATTATTGGTGCTGTAATTGGTGTTGCCAATTTCGATCCCGTCAAACGAAGCTGA 360 0.5056 MASTSALSMAMPVTCASHKKVVPTSDAFFKPLPLRSSKALTASNPNGRFQVRASMKEKVVTGLTAAALTASMMAPDVAEAAVSPSLKNFLLSIAAGGVVVVAIIGAVIGVANFDPVKRS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00337 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Vian4g00337 119 Gene3D Single helix bin 81 119 - -
Vian4g00337 119 PANTHER OS07G0673550 PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00337 Vian-Chr4 3748893 3749252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00337 - - gmx:100306291 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00516 1 4892620 4893156 Vian4g00337 4 3748893 3749252 PCT