Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00333 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAACTTCTGCGGGAAAATAAGAGGATGCTGGACAAATCAATTAGAGAAATTGAGCGCGAGCGGCAAGGTTTGCAAACACAAGAGAAGAAATTGATTTTGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTGGTTAGAACACGGCATCAGATTGAGAAGTTTTATAAGCTAAAATCTCAGCTCCAAGGTGTATCCCTCCGAATTCAGACTTTGAAATCAACACAAGCAATGGGTGAGGCTATGAAAGGCGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCATCTTTGCAGAAAATCATGCAGGAATTTGAGAGACAGAATGAGAAGATGGAATTGACATCTGAGATGATGGGAGATGCTATAGATGATGCTTTGGAAGGAGAAGAAGATGAAGAAGAAACTGAGGATCTAGTGAACCAAGTTCTTGATGAGATTGGAATTGACATCAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCAAAGACCAAGGTAGCTCAAGTTGAAACTTCTGGGAATGATGATGGAGGGATAGATAGTGACCTACAGGCAAGGTTAGACAATTTGAGAAAAATGTAG 672 0.4211 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVAQVETSGNDDGGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00333 223 MobiDBLite consensus disorder prediction 198 223 - -
Vian4g00333 223 Coils Coil 119 139 - -
Vian4g00333 223 Coils Coil 12 46 - -
Vian4g00333 223 Gene3D - 6 181 - -
Vian4g00333 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Vian4g00333 223 Pfam Snf7 17 186 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00333 Vian-Chr4 3696339 3700551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00333 K12191 - gmx:100526885 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00333 4 3696339 3700551 Vian4g00333 4 3696339 3700551 ECH
Vian1g00518 1 4904847 4907503 Vian4g00333 4 3696339 3700551 PCT