Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00518 ATGAGTTTCATCTTCGGAAAGAGGAAAAACCCTGCAGGATGTACACCTTTAGAAATCGTGAGGGAGAATAAGAGAATGCTGGACAAATCAATTAGAGAGATAGAACGAGAGAGACAAGTTTTGCAGTCACAGGAGAAGAAACTGATTTTAGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGTTTTTTGTTGGAGCATTGTCTACTGCTAGCAAATTTGTACTTGTGCACATCATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACTAGACATCAGATTGAAAAGTTTTACAAGCTCAAATCGCAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCGATGGGTGAGGCAATGAAAGGGGTGACTAAGGCAATGGGACAGATGAACTTGCCATCATTGCAGAAAATCTTACAGGAATTTGAGTATCAGAATGATAGGATGGAATTGATTACAGAGGTGATGGGAGACACAATGGATGATGCTTTTGAAGGGGAAGAGGAAGAAGAAGAAACAGAAGAACTGGTGAATCAGGTTCTTGATGAGATTGGTATCAACATCAACCAAGAGCTTCTGAATGCACCATCAACAGCTGTTGCTGCTCCAGCTGCAAAGACCAAAGTGCCTCAAGTTGAAACTGTTGGGGATGATGCCGCCCTAGATAGCGATTTACAAGCAAGGTTAGACAATTTAAGAAAACTGTAA 726 0.4105 MSFIFGKRKNPAGCTPLEIVRENKRMLDKSIREIERERQVLQSQEKKLILEIKKSAKQGQMFFVGALSTASKFVLVHIMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNLPSLQKILQEFEYQNDRMELITEVMGDTMDDAFEGEEEEEETEELVNQVLDEIGININQELLNAPSTAVAAPAAKTKVPQVETVGDDAALDSDLQARLDNLRKL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00518 241 Gene3D - 13 199 - -
Vian1g00518 241 Pfam Snf7 22 205 IPR005024 GO:0007034
Vian1g00518 241 Coils Coil 17 51 - -
Vian1g00518 241 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 239 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00518 Vian-Chr1 4904847 4907503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00518 K12191 - gmx:100819241 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00518 1 4904847 4907503 Vian1g00518 1 4904847 4907503 ECH
Vian1g00518 1 4904847 4907503 Vian4g00333 4 3696339 3700551 PCT