Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00330 ATGTTGTCGAGAACGGAGGCTGGGAAGAAGAGTGGTGGGGGTTCTAGTGCCCCGAAGAAGTTGTTAAAGGATGTTGAAACCATTAACAAAGCGTTGTACTTGGATAGAGGGTCTACAAGGAGTTCAATACCTGGTGCAAATTCTCGATCTAAATTCACTGGGAAATCTCAGTTACCTGATCCCAAATCTAAGTCTAAAACCAGTGTTAATAATAACAATGATGATGGTGTTCAAAAGGATAAGAAGTCCATTTGGAATTGGAGGCCTCTAAGGGCCCTTTCCCACATCCGAAACAAGAGGTTTAATTGTAGTTTTTATCTGCAAGTTCACCTGATTGAAGGGTTGCCTCCAAGTTTTGATAATGCCAGTCTTGCTGTGTACTGGAAAAGGCGTGATGGGGTTCTTGTGACTGGTCCTGCCAAGGTGATTCAGTCTGTGGCTGAATTTGAAGAGAAGTTGACCTACACTTGCTCAGTGTATGGCAGTAGGAGTGGACCTCACCATTCTGCCAAGTATGAAGCAAAGCATTTTTTGCTCTATGCTTCGCTTCTGAGTGCCCAGGAGATGGATTTGGGAAAGCACCGGGTGGATCTGACAAGGTTGCTTCCTCTCACTCTGGAGGAGCTGGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTATCGGGAGTGGCTAAGGGTGCTGTGATGAATGTCAGTTTTGGCTACACGGTTGTTGGTGATAATGCTAGTACTACCAGAGACAGCCATAATGCTTCTAACGTATTGAGTTCCAGGCAGAATAGTTTTGCTCTGATGAAACAAGATGTTAAACCCCGACAGTTTGATGGAAGCAGCAGGATGAGGCGAACCACGAGTATGCAGTTATCACCTCGAGCTTCAGATGAGGTAAAGGATCTTCATGAGGTGTTGCCATTGACTAGGTCTGCACTAGCCAGCTCAATAGACATCTTATATAAGAAATTTGATGAAGAAAAGGCTAGTTCTATGCTTAGCGAAGCAGAACTTGATTCGTTCTCCGAAAATCTTGGGTCAATCAAGCCAGATGCATATGCCTCTGATTTTGGAAAAGAAACATTTGACGAGCATGTGAGTAAGGCTGAAGATAAATGTCCAGTGCACGAGGAACCTGAACTTTCAGTGTTTCAAGAAAAACTGGAGATATTTAAACTAGATGACAATCCTTTACCTGATTCTACAAATGAAAACCCTGAACACTTTCAAGGTAATGAATTTTTTGTTGTTGATAAGGGAATAGAACTGTCATCAAATGAACCCGTTATAAGAGAGGAATTCATTAGGAAGGCTCCTGAGGATGCTTCTACAGTTGATACTGCCTATACCCTTGACATATCAGGTACACAAGAACCTTTTGAAGACAGTGTTAAACATGATTTTCTTGATGAGGTAAATGATATTTCTAAGGACCAGGTAGTGGTAGAGGAATTTGCTATGAAAGAGGATGGCTTTGACAGTGATACTAATGAGCTGCTCCTGCAAGAACTAGAATCTGCTTTAAATAGTGTATCAAATTTGGAGAGAGTGGCACTAGAATCTCCAAAAACAGCAGAATTTAAATCTGAACATAAGATGACAAAGTCACATAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGATTTTTTAAGCATGTTAGACTTAGAACGTAGTCGTCCAATGGCCTTGAGTTCTGAAAGTGAACCCGAATCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTTTGGACGGGGACTTCTCCTCTTTGTTTGATTTTGAAATGAACCATGATAATGAAGCAGATGGTGGCTATGATGGTTCCGCTGCATCTGAGCAGTGGAACTTTTCTGAAGATGTCAGGTCATCATCCCTTTTGCAAGACCTGCAGGAGGAGCATCTAGCCGAGTCTCAGGATGTGAGAAGCAAACAGAGGGCTCAGACACTAGAAGACTTGGAAACAGAAGCCTTGATGCGTCAATGGGGTTTGAATGAGGAGGCTTTTCATCATTCTCCACCAAAAGATTTTACTGGTTTTGGAAGTCCAATTCCTTTGCCACCTGAAGAGCCTCCTATATTGCCTCCTCTTGATGATGGGTTGGGCCCATTTCTTCAGACAAAAGACGGGGGTTTCCTACGCTCTATGAATCCCTCACTTTTCAAGAATTCTAAAAGTGGTGGGAGTTTAATCATGCAGGTATCCAACCCTGTCGTTGTACCAGCAGAAATGGGTTCCGGGATAATGGAGGTTTTGCAGTGTTTGGCTTCAGTGGGAATTGAAAAGCTCTCAATGCAGGCTAAGGAGTTGATGCCTCTAGAAGATATCACAGGGAAGACAATGCAACAAGTAGCATGGGAAGCCATGCCTGTCTTAGAAGGAGCAGAGAGGCAAAGCCATTTGCAGCATAATCCAATAACAAGGCAGGACAGTGCTCATGTGCAAAGGGACTTGAAAGGAATGCCGTCTGTACAAAAGTCTGGCAAGTTTAGTTCAAGAACAGTGGCCAACCAACCAGGATCAGAGTTTGTTTCGGTTGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATACAATCTGGGATGTCAGAAGAGGAGGCACCATCAAACATCATTGCACAGTCCATTGGGGATATTTCGGCTCTGCAGGGCAAGGGTTTTGATATTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGTTGATGGATGTAAAAGATGGCGGTGACAGTGGTGATGGTGTGGATGGGATAATGGGCCTATCATTAACTCTTGATGAATGGATGAGGCTGGATTCCGGTGAGATTGATGATATAGATAATATCAGTGAGCATACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCCAAGGGAGAGAAGAGACGAGGCAAAAGCAGAAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGACCCTCTGAGAAATTACGAACCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAAGATTTTCAACAGTGTGTCTTTGATGATGAAGAACAATGACGAGGATGATGATGATGATAGGGAAATCCTTGCGAAGGTGGACGTGAAGGACACCAAGAACGAGGAGAATACTTCCGAAGAGGAAGAGGGCATTCCTCAGTTCAGAATCACAGAAGTCCATGTGGCAGGTCTGAAGCCTGAGCCTCAGAAAACGAAGTTCTGGGGCACTTCAAACCAGCAACAGTCTGGTTCTCGCTGGTTGCTTGCAAATGGAATGGGGAAGAACAATAATAACAAACTTCCATTGATGAAGCCAAAGGGTTCATCTAAATCTAATGCTCCAGTTATCTCAAAGGTGCAACCTGGTGACTCCTTGTGGAGCATATCATCTCGTCTTTTTGGCAATCGAGGGAAATCACATGTAAGAAACCCCGATGTCGTTATGCCAAATGACACTATAAGGCTCAGCTGA 3555 0.4377 MLSRTEAGKKSGGGSSAPKKLLKDVETINKALYLDRGSTRSSIPGANSRSKFTGKSQLPDPKSKSKTSVNNNNDDGVQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDNASLAVYWKRRDGVLVTGPAKVIQSVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSAQEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGVAKGAVMNVSFGYTVVGDNASTTRDSHNASNVLSSRQNSFALMKQDVKPRQFDGSSRMRRTTSMQLSPRASDEVKDLHEVLPLTRSALASSIDILYKKFDEEKASSMLSEAELDSFSENLGSIKPDAYASDFGKETFDEHVSKAEDKCPVHEEPELSVFQEKLEIFKLDDNPLPDSTNENPEHFQGNEFFVVDKGIELSSNEPVIREEFIRKAPEDASTVDTAYTLDISGTQEPFEDSVKHDFLDEVNDISKDQVVVEEFAMKEDGFDSDTNELLLQELESALNSVSNLERVALESPKTAEFKSEHKMTKSHSLDDVTESVASDFLSMLDLERSRPMALSSESEPESPRELLLRQFEKEALDGDFSSLFDFEMNHDNEADGGYDGSAASEQWNFSEDVRSSSLLQDLQEEHLAESQDVRSKQRAQTLEDLETEALMRQWGLNEEAFHHSPPKDFTGFGSPIPLPPEEPPILPPLDDGLGPFLQTKDGGFLRSMNPSLFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQVAWEAMPVLEGAERQSHLQHNPITRQDSAHVQRDLKGMPSVQKSGKFSSRTVANQPGSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGFDISGSLGLDGAAGLQLMDVKDGGDSGDGVDGIMGLSLTLDEWMRLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQKIFNSVSLMMKNNDEDDDDDREILAKVDVKDTKNEENTSEEEEGIPQFRITEVHVAGLKPEPQKTKFWGTSNQQQSGSRWLLANGMGKNNNNKLPLMKPKGSSKSNAPVISKVQPGDSLWSISSRLFGNRGKSHVRNPDVVMPNDTIRLS 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00330 1184 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g00330 1184 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 243 IPR019448 -
Vian4g00330 1184 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1178 IPR039614 -
Vian4g00330 1184 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Vian4g00330 1184 MobiDBLite consensus disorder prediction 38 80 - -
Vian4g00330 1184 Coils Coil 498 518 - -
Vian4g00330 1184 MobiDBLite consensus disorder prediction 277 297 - -
Vian4g00330 1184 MobiDBLite consensus disorder prediction 38 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00330 Vian-Chr4 3659925 3663574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00330 - - gmx:100815106 1701.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00330 4 3659925 3663574 Vian4g00330 4 3659925 3663574 ECH
Vian1g00524 1 4963431 4966928 Vian4g00330 4 3659925 3663574 PCT