Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00316 ATGGCGATCTCCGATGCGCCTGAAAGCGTAGGCACCGCCACCGGTCAAAGCGACTCAGATCTCAGACTTCTTTCTCTGCGGCGCAGGTCCAGCGCCACCTCCCCGGGCAGCTGCTTCGATGCCGAAGATGCCGCCAGAAGTTCTGGCTTCCAGGAATCCTTGAACAACAAAAACGTCGACGACAATAAAGATTGCAAGTCGAATCATGCAGCCTCCGATCATATTGTTAACAATGACGCTCGGAAAGAGCACGGAGAACAAGTCATCGATGTCAAATACGCTTACCGTCCCTCCGTTCCTGCTCACCGCAGAATCAAGGAGAGCCCGCTCAGCTCCGATAACATTTTCAGACAGAGTCACGCAGGACTGTTCAATCTCTGTATAGTAGTTCTTGTTGCGGTGAACAGCAGACTTATCATTGAGAACTTAATGAAGTATGGTTGGTTAATTAAGTATGGCTTTTGGTTTAGTTCAAAATCATTGCGAGATTGGCCCCTCTTCATGTGCTGTCTTAGTCTAAACATATTTCCACTTGCTGCCTTTATAGTGGAAAGGTTGGCACAGCAAAAGTGTATTTCTGAACGGGTTGTTGTTTTACTTCATCTAGTCATCTCAACTGTTGAATTATCCTACCCAGTTTTAGTAATACTCAGGTGTGATTCGGCTTTTGTATCCGGTGTCACGTTAATGCTATTTACTTGCATTGTGTGGTTAAAATTGGTGTCATATGCCCATACAAACTATGACATGAGAGCACTTGCTGTTTCAAAAGAAAAGGGAGAAACATTACCCAATACTTTGATTATGGAGCATCCATATACTGTGACGATCGGGAGTTTGGCATACTTCATGGTTGCACCTACATTGTGCTATCAGACAAGCTATCCTCGCACCCCTTCTGTTCGAAAGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACTGGAGTAATGGGATTTATAATAGAGCAATATATGAATCCAATTGTACAAAATTCACATCATCCTTTGAAAGGAAACCTTCTATATGCCATTGAAAGAATACTGAAGCTTTCTGTTCCCAATGTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCAGAGCTTCTCCGATTTGGTGATCGTGAGTTCTATAAAGATTGGTGGAATGCAAGAACTGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTGCACAAATGGATGGTTCGCCACATATATTTTCCGTGCATAAGGAATGGTATACCCAAGGGTGGTGCTTCATTAATTGCCTTCCTGGTTTCTGCTGTTTTTCATGAGTTATGCATTGCCGTTCCTTGCCACGTGTTCAAGTTGTGGGCATTTATAGGAATTATGTTTCAGGTTCCATTGGTCTGGATCACTAATTACCTGCAAAACAAGTACAGGAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTTTGTATTCTTGGTCAACCTATGAGCGTACTATTATACTACCATGACTTGATGAATAGAAAAGGAGAAGTTGACTAA 1551 0.4223 MAISDAPESVGTATGQSDSDLRLLSLRRRSSATSPGSCFDAEDAARSSGFQESLNNKNVDDNKDCKSNHAASDHIVNNDARKEHGEQVIDVKYAYRPSVPAHRRIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKYGFWFSSKSLRDWPLFMCCLSLNIFPLAAFIVERLAQQKCISERVVVLLHLVISTVELSYPVLVILRCDSAFVSGVTLMLFTCIVWLKLVSYAHTNYDMRALAVSKEKGETLPNTLIMEHPYTVTIGSLAYFMVAPTLCYQTSYPRTPSVRKGWVFRQLVKLIIFTGVMGFIIEQYMNPIVQNSHHPLKGNLLYAIERILKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTVEEYWRMWNMPVHKWMVRHIYFPCIRNGIPKGGASLIAFLVSAVFHELCIAVPCHVFKLWAFIGIMFQVPLVWITNYLQNKYRNSMVGNMIFWFIFCILGQPMSVLLYYHDLMNRKGEVD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00316 516 PIRSF Oat_ACAT_DAG_ARE 9 516 IPR014371 GO:0008374
Vian4g00316 516 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g00316 516 PIRSF Oat_dag 11 516 IPR027251 GO:0004144|GO:0019432
Vian4g00316 516 Pfam MBOAT, membrane-bound O-acyltransferase family 219 499 IPR004299 -
Vian4g00316 516 PANTHER STEROL O-ACYLTRANSFERASE 55 512 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00316 Vian-Chr4 3502414 3518611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00316 53 515 Lipid Metabolism Gene Families AT2G19450 69.421 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00316 K11155 - gmx:547982 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00316 4 3502414 3518611 Vian4g00316 4 3502414 3518611 ECH
Vian1g00542 1 5135267 5144879 Vian4g00316 4 3502414 3518611 PCT