Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00298 ATGGTGGTGAAGAAGCCACGGATAGTGATAATTGGAGCAGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTTTTTGAGCTATGTGTTGTGGAGGGTGGAAGCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACATGGATCCATGGAATTGGAGGCAGTCCAATTCACAAAATTGCTCAAGAAATCCACTCACTCCGCTCTGACCAACCTTGGGAGTGCATGGATGGGAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTCCACCTCCACCCTTCCATTGTTGACCCCATTACAAAGCTCTTCAACAACCTCATGGAATATTCTCAAGGGAAGCTCAATGAAGCCACTGCAAAGGGTGAACTTGAAAGTTATCACAAGCTGGCTGCTTTGGCTGCTAAGGTTGCTTCCAACAGGTCTGGTAACAACAACCTTAGTATTGGCTCTTTTCTGAGACAAGGCCTAGAGACTTACCAGATTTCAAAGGAGCAAGAGGAGGTCAAAGGGTGTGGGGAGTGGAGCAGGAAGTTACTTGAGGAAGGAATATTTGGAATGCATGAGAACAACCAGAGGACCTATACATCAGCTGATGACCTCTTGACACTGGATTATAGTGCTGAAAGCGAGTACAGAATGTTCCCAGGTGAAGAAATCACAATTGCTAAAGGGTACTTGAGCATAATTGAGTCCTTAGCTTCTGTGTTGCCACCTGGTTTGATTCAGTTAGGTAGAAAAGTCATAAGGATTGAGTGGCAGCTTGATGAGAGGAAGGGTTTGGAAAATGGCTGTTGTTCTTCTAAGCCTGTGAAGCTGCATTTTTGTGATGGCTCCGTTATGTCCGCTGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTAAAATCTGCTATTCGTGATGATTCAGGTATGTTCTGTCCTCCTCTTCCCTCTTCCAAAACTGAGGCAATTTCAAGGCTTGGCTTTGGGGTTGTTAACAAGTTGTTTATGCAATTAAGTCCAAAACATGGAGGAGGGAAACATGAATACCAACATGAACATGTAAATGATGACTCCGACAAGGGGTTCCCTTTCCTGCAAATGGTTTTCCATTCACCTCAATCTGAAACGAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCCACCCTTTTCCCCATATACAACAATTCGAGTGTCCTCTTGTCTTGGTTTGTGGGGGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAGGAGATCATAAATGGAGTTTCATCCACAGTCTCGTGCTTTCTACAGCATTCTCAGTGGCAAAAGGGTTCCAGTTCACATAGATTGTGCAATGGGAATGCCAATTCTGAGGAGAGATCTCAAGAAAATGAGGTGAAGTTCAGTAAGGTCTTGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCTGTAGGGTCAAGTGGTGATGATTTAGATGCAATGGCCGAGCCATTGCCAAAAGATAGCAGTTGTCAGCCTTCTGCTTCTTCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTCAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTACAATAACTAG 1719 0.4508 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDFFELCVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLRSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNNLMEYSQGKLNEATAKGELESYHKLAALAAKVASNRSGNNNLSIGSFLRQGLETYQISKEQEEVKGCGEWSRKLLEEGIFGMHENNQRTYTSADDLLTLDYSAESEYRMFPGEEITIAKGYLSIIESLASVLPPGLIQLGRKVIRIEWQLDERKGLENGCCSSKPVKLHFCDGSVMSADHVIVTVSLGVLKSAIRDDSGMFCPPLPSSKTEAISRLGFGVVNKLFMQLSPKHGGGKHEYQHEHVNDDSDKGFPFLQMVFHSPQSETRHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKGSSSHRLCNGNANSEERSQENEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDSSCQPSASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00298 572 Gene3D - 477 504 - -
Vian4g00298 572 Gene3D - 8 338 IPR036188 -
Vian4g00298 572 FunFam Putative polyamine oxidase 5 isoform A 505 559 - -
Vian4g00298 572 Gene3D - 92 450 - -
Vian4g00298 572 PANTHER FLAVIN MONOAMINE OXIDASE 6 566 - -
Vian4g00298 572 Gene3D - 505 559 IPR036188 -
Vian4g00298 572 FunFam Putative polyamine oxidase 5 isoform A 3 116 - -
Vian4g00298 572 SUPERFAMILY FAD/NAD(P)-binding domain 3 564 IPR036188 -
Vian4g00298 572 SUPERFAMILY FAD-linked reductases, C-terminal domain 340 498 - -
Vian4g00298 572 Pfam Flavin containing amine oxidoreductase 15 561 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00298 Vian-Chr4 3267797 3269515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00298 K12259 - gmx:100783032 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00298 4 3267797 3269515 Vian4g00298 4 3267797 3269515 ECH
Vian1g00564 1 5393947 5395281 Vian4g00298 4 3267797 3269515 PCT