Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00564 ATGGATGGGAACGACAACAAGGCTACCACCATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCCTTTGTTCACCCCATCACCGAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAGGATGTCAACAGCAACAACCAAGGGTGAGAGCGGAATCCTCAGTATCGGTTCTTTTCTCAGACAAGGCCTCGATGCTTATTGGGGTTCATCAAAAGAGGAAAAGGAGCTCAAAGGGTTCGGAAAGTGGAGTAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCATGAGAACACGCAGAGGACTTGTACATCTGTTGCTGACTTGTTGACTTTGGATTATGACGCAGAAAGTGAATACCAGATGTTCCCGGGGGAAGAAATCACAATTGGTAAAGGCTACTCAAGCATAATCGAATCGTTAGCATCTGTGCTACCACCTGGTTCGGTTAAGTTGGGAAGAAAAGTCACAAGAATCGAATGGCAACCCGAGAGACACGAGGCGATGAATATGGAAAATGGAACACGTTCTAGGCCCGTGGTGCTACATTTCTCTGATGGCTCTGTTATGTCTGCGGATCACGTCATTGTCACGGTTTCACTGGGAGTGTTGAAGGCTTCTATCCGTGATGATGATTCAGGTATGTCAATGTTCCATCCCCCTCTACCATCCTTTAAGGCTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAACAAGAGACGAGCACTCCAGAGGGTTCCCCTTCTTGCAAATGGTTTTCCATTCACCTAACTCTGAGTTGAGGCAGAAGAAAATACCCTGGTGGATGAGAAGGACTGCTACTCTTTGTCCTATCTACAACAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGGGAAGAAGCTCTGGCACTCGAGTCACTCAAAGATGAAGAGATCATTAAAGGGGTTTCGGACACAGTTTCATGTTTCCTGTCACATTCAGTTGAGTTTTGCAACGGGAATGGGAATTCTGAAAAGCACTCCCAAGAATATAAGGTAAAATTCAGTAAAGTGTTGAAGAGCCAATGGGGAACAGATCCTTTATTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATAAAATGGCAGAACCTTTGCCAAAATGCAGCAGCAGCAGCAGTCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCACTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTATTCAACATTATTCATCATGTTAA 1335 0.4502 MDGNDNKATTIAEGGFVLNPSFVHPITELFNNLMDHAQGRMSTATTKGESGILSIGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYDAESEYQMFPGEEITIGKGYSSIIESLASVLPPGSVKLGRKVTRIEWQPERHEAMNMENGTRSRPVVLHFSDGSVMSADHVIVTVSLGVLKASIRDDDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGTRDEHSRGFPFLQMVFHSPNSELRQKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKDEEIIKGVSDTVSCFLSHSVEFCNGNGNSEKHSQEYKVKFSKVLKSQWGTDPLFLGSYSHVAVGSSGDDFDKMAEPLPKCSSSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLIQHYSSC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00564 444 Gene3D - 117 436 IPR036188 -
Vian1g00564 444 SUPERFAMILY FAD-linked reductases, C-terminal domain 233 373 - -
Vian1g00564 444 PANTHER FLAVIN MONOAMINE OXIDASE 9 442 - -
Vian1g00564 444 SUPERFAMILY FAD/NAD(P)-binding domain 47 441 IPR036188 -
Vian1g00564 444 FunFam Putative polyamine oxidase 5 isoform A 380 436 - -
Vian1g00564 444 Gene3D - 7 379 - -
Vian1g00564 444 Pfam Flavin containing amine oxidoreductase 20 438 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00564 Vian-Chr1 5393947 5395281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00564 K12259 - gmx:100809633 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00564 1 5393947 5395281 Vian1g00564 1 5393947 5395281 ECH
Vian1g00564 1 5393947 5395281 Vian4g00298 4 3267797 3269515 PCT