Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00276 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTGGCTGCTACTTTGCTGAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAACATCTCACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATTGTTACAACACTTCTGGCGGTGTTTTCTCTTCTCCTTGCTCTCCTTCTCCCAGTGAGAACAACACAGCCAGTGCCTTCAGGCAGAACCATTTCTTGGCTGCCTACACTTCTTCTGATTTCAGTTCTCCATTTCTGTTCTCTTCACAGAAGAAGGCCTCCGTGTTTCCCATCACCGAGTCACCACCACCACCACCACCCTCTTCCAAGGAGGATATAAAGGTTGTTCTTGATGTCCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGTGACTCGGTGGCACTCACTGAAGGCCTTGTGGGAGAGCTGATGGGGAAGTTGGAAAGAGGAGATGTCCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTCTGAGGTTCATGAAAAGGGAAGAAGTGGAGATGAGTCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAGGAGGAGGAGCCATTTTCTATGTTGGAGACCTCAAGTGGACTGTAGAAGCAACAACTTCTAGTGAAAAGGATGAAGGAGAAGTCTGTGGCTATAACCCAGTTTGTCATCTACTTGCTGAAATAGGGAAGTTGTTTTGTGATTCCAACACAAAGGTGTGGCTTGTGGCCACAGCTAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTACGTACGGTCTCTGGACTATGCCAGAAGCCACTGTCAAAAGCATGGTTGGTTGTGTTCACGATTCAAAGATGACAATCTCCCAGAATCCATCTCATATGCTGGAAACAAAGCTCTTCAGTAACAGCAAGGAGGAGCAGGATAAACTCAACTGCTGTGAAGAATGTGCCTCCAATTATGAAAAGGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTACCTTCATGGCTTCAGTCTCACACCACTGAAGCCCATCAAAAGGATGAGTTGCATCAGTTGAAAAGAAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAACAGTCTGATAACCATTGGAGCAACACTTTACACGGCAATCAGAGTTCAAATGGGAAGATCTACCCTTACAATTCATCGTATCCCTGGTGGCCAAACCAGGGCAGTGTGTTCACAGATTCAAGTTCAATATCTTTCGCCGATTCACCTGCCAAACCGGCATATAGCTCCAACATTGTCCCTCGGTTTCGGCGCCAACAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAGAAAGCCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAGTAACGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCCGAGGCATTGGTTGATTCCAAATCTGCAAAGCAGAGTGCCACTACTTGGTTGTTGTTGCAAGGAACTGACTCTGTTGGGAAAACAAGGTTGGCACGAGCGATTGCAGAATCGGTGTTTGGCTCAGTTGATGTGCTCCTTCACTTGGACATGCTGAAAAATTCAGCAACCCCATTTGCCGAAAGGGTGGCTGGAGCCTTGAAAAGCCAGGAGAAGCTTGTGATTCTGATAGAAAATTTGGATTTTGCCGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGGAAACTTTGGAAGTTTAAGTAGGACTGAGGAGAGTTCAGGCCGTGCAATATTCATACTGACAAACGGTGACACAAGGGGCAATGAAGAGCAGAACAATAAGGAGTCGGTGATGAAGTTGGTGCTGAAGATAAGTGAAACGAAGGCTGGTTTGGAGTCTTCATCACCTTGTTCGGGTGAGAAGAGAAGGGCTGAAGTGCTGGATTTGTTTTCCAAGGTTAAGAATCGAAGGGTGGAGGGTAGGAAAGTGTTTTGTCGGCATTCAAGCTTCAACAATCTAGACCTGAACATGAAAGCTGATGAAGAGGATGATGATGGGGAAGAGAAAACAGGTGGAAGCAGTCCAATTTCAAGTGACTTGACAAGGGAAACTGTGGCAGATCCATTGAGCTGGAATGGGGTTCTTGAGTCAATAGAGAACAGGTTTGAGTTGAATGAAAGTGCAGAGAGTGAGAGGGAGGTGGGAGAGATGTTGGTGTCAAAGATGAAAGAATGGTTTGAGGAGGTTTATGGAAAGAAAGAAAGTGTGGTGAAATTTACTGTAGAGGAGAGGGTGATAGAAGAAATTGGTGTGGGGTGTGGAAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTACAGACAGTTAACTTTGGTGGGGTGGAGGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGTGATAGCAAATGGGATAATGGATTCATGGGTTCATGTTTGCCCAAGAATCTCCAAGTTAACTACTTCATGGATTAA 2841 0.4608 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNCYNTSGGVFSSPCSPSPSENNTASAFRQNHFLAAYTSSDFSSPFLFSSQKKASVFPITESPPPPPPSSKEDIKVVLDVLLRKKKRNTVIVGDSVALTEGLVGELMGKLERGDVPDELKSTHFIKFQLAPVSLRFMKREEVEMSLSALKRKVDSVASGGGAIFYVGDLKWTVEATTSSEKDEGEVCGYNPVCHLLAEIGKLFCDSNTKVWLVATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSTYGLWTMPEATVKSMVGCVHDSKMTISQNPSHMLETKLFSNSKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELHQLKRKWNRLCHCLHQSKQSDNHWSNTLHGNQSSNGKIYPYNSSYPWWPNQGSVFTDSSSISFADSPAKPAYSSNIVPRFRRQQSCTIEFNFSDVTQRKPSTALDSLKGMEGNSNEVKITLALGNSTFGGSGQTVENIITTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKQSATTWLLLQGTDSVGKTRLARAIAESVFGSVDVLLHLDMLKNSATPFAERVAGALKSQEKLVILIENLDFADAQFRKFLADGFETGNFGSLSRTEESSGRAIFILTNGDTRGNEEQNNKESVMKLVLKISETKAGLESSSPCSGEKRRAEVLDLFSKVKNRRVEGRKVFCRHSSFNNLDLNMKADEEDDDGEEKTGGSSPISSDLTRETVADPLSWNGVLESIENRFELNESAESEREVGEMLVSKMKEWFEEVYGKKESVVKFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLQTVNFGGVEGGIGFTLCWGGKGDSKWDNGFMGSCLPKNLQVNYFMD 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00276 946 Gene3D - 141 320 IPR027417 -
Vian4g00276 946 MobiDBLite consensus disorder prediction 783 809 - -
Vian4g00276 946 Gene3D - 553 739 IPR027417 -
Vian4g00276 946 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 120 907 - -
Vian4g00276 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 708 IPR027417 -
Vian4g00276 946 Gene3D - 9 107 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00276 Vian-Chr4 2959297 2963378 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00276 - - gmx:102660146 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00276 4 2959297 2963378 Vian4g00276 4 2959297 2963378 ECH
Vian1g00597 1 5782279 5786066 Vian4g00276 4 2959297 2963378 PCT