Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00259 ATGGGAGCCTGTTTTTCTTCCAAACCATCCTCCACAACCAACAATGTCCGTTTGGTTCATCTCAGTGGATATGTGGAGGATTTTGAGAAGCCAATTTCTGTGAGCCAACTCACTGGCACCTCTCAGAAGCACTTTGTTTGTACCTCACTTCAGCTTCTTTCACCTTGCTCAAAACCATTGAATGGAGACACAGAACTTCAACCTGGGAATGTCTACTTCATGCTACCATACTCAATCCTTCAAGCTGATGTTTCTCCTGTGGATTTGGCTTCCCTTGCAAAGAGGCTCACTGCAATAGCAAAAACCAGCAAAGGGTCTTCCCTCAAAGATGGTCCTTTCTCAAGCCAGCAAGGGTTGAACGATGTTTGGAATTCGCCTTCAAGGAGTCCTGGGAGGCTTGGTGTGGTTGAACGAAGTCCGTGTAGAGTGCAGCCTTGGAAACCTATCTTGGACACCATCAGAGAGAAGTCTTTCAATCGGAGAAGTGAATCAGATTTGCAAGAACATATTTGA 513 0.4561 MGACFSSKPSSTTNNVRLVHLSGYVEDFEKPISVSQLTGTSQKHFVCTSLQLLSPCSKPLNGDTELQPGNVYFMLPYSILQADVSPVDLASLAKRLTAIAKTSKGSSLKDGPFSSQQGLNDVWNSPSRSPGRLGVVERSPCRVQPWKPILDTIREKSFNRRSESDLQEHI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00259 170 MobiDBLite consensus disorder prediction 104 136 - -
Vian4g00259 170 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 155 - -
Vian4g00259 170 Pfam PADRE domain 1 155 IPR025322 -
Vian4g00259 170 MobiDBLite consensus disorder prediction 104 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00259 Vian-Chr4 2753326 2753838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00259 - - gmx:100810460 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00259 4 2753326 2753838 Vian4g00259 4 2753326 2753838 ECH
Vian1g00612 1 5951448 5951963 Vian4g00259 4 2753326 2753838 PCT