Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00612 ATGGGGGCTTGTTTTTCTTGTGACTCATCCTTCATATTGAAGCATATCCGTGTGGTTCATATGAATGGTTATGTAGAGGATTTTGAGCAACCGATTTCAGTGAGGCAAGTGATTGGGCACCCTTCAAAACACTTTCTTTGCACTTCCACCCAGCTTCTTTCCGCTTCCTCAAAATCAATGACCAGAGAAACACACCTCCAACCTGGGCAAGTGTATTTCATGCTGCCATACTCGGTACTACAAGCTGATGTTTCTCCGGTGGACCTGGCTGCCCTTGTAAAGAGACTCAGCGCAGTAGCCAAAGCAAGTCCTTTGTCGAGCCAAAATCAAACACTTTGGTCTTCACCTTCTACGAGTCCTATCAGAGGTGGTCCGGCAGAGCAATATGGTGTTGGTAAGATGAACATCGGTGGAAGAAGCCCTTGCAAAGTACAACCTTGGAAACCTGTCTTGGACTCCATATCAGAGAAGCCATGTCATAGGAGGAGTGAATCGGATTGGCAAGAAAGTTATTGA 516 0.4612 MGACFSCDSSFILKHIRVVHMNGYVEDFEQPISVRQVIGHPSKHFLCTSTQLLSASSKSMTRETHLQPGQVYFMLPYSVLQADVSPVDLAALVKRLSAVAKASPLSSQNQTLWSSPSTSPIRGGPAEQYGVGKMNIGGRSPCKVQPWKPVLDSISEKPCHRRSESDWQESY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00612 171 Pfam PADRE domain 1 156 IPR025322 -
Vian1g00612 171 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00612 Vian-Chr1 5951448 5951963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00612 - - gmx:100785670 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00612 1 5951448 5951963 Vian1g00612 1 5951448 5951963 ECH
Vian1g00612 1 5951448 5951963 Vian4g00259 4 2753326 2753838 PCT