Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00252 ATGGGATGTTCACATTCAAGGTTGGATGATGAAGAGGCAGTTCAGCTTTGTAGAGACAGAAAGAAGTTCATCAAACAAGCTGTTGAGCATAGGACTCGGTTGGCCACTGGACACATAGCATACATAGAATCTCTGAAAAGAGTTTCAGCGGCACTTCGTGATTACATTGAAGGTGATGAACCTCGCGAGTTCTCATTGGACAATGCCATCACCCCACCTTTCACACCTGTGAAGAAGAAAAGTGGCCCGGGATTCATTCCTATATCAGCAAAACCCTTCGCAGCAACAGGAGCTATTGAGTTTGGGATCGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGACCTGGTGGTAACCCAGCAATTTCAGTTGAGGAAAGACCTCAATCTCCGGAAAGGGTACGTGTTGAGACATATTATCCTCCAATGCAGCAGTATGGCTTTGATGGATTTTTCAACATGCAATCCTCACCGGTGAATCCCTCAATTTTTGCCTATTCTCCCAATAATAGGCCTACTATCCCTCCCCCTTCACCTCAAGCTTCCCAATGGGATTTCTTTTGGAACCCCTTTTCTTCTTTGGACAGCTATGGCTATCCTGCAAAAAGTATTGATCATGCTGCAATGGATGATGAATACAGAGGACTCAGGCAGGTTAGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACATGAAGATGGTGTTGGAAAAAGAAATGTAGCAGAAGAAAGAACTAGACCCAACATGAATTCTTCAAAAGAAGAAGTTATTGTTGAAGATGTTGAAGATGATGATGATGATGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGAATGAGGAGGAGGAAGAGGAGGAAGAAACAGACATTGAAGATGCAACTGAGCATGTTGCCAAAGATTCCCAAGCTCATGGAAGTGCAAGTTTTGAAGTATCAAAAGCTCAAGCTGCTGGTCATATTGAATCTAGCCATAGAGAAATGACAATTGGTAAGAAAGATGCTGTGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGATATTGAAACTCAATTCACAATCGTATACAATGCAGCTAAAGATGTTGCAGCATTGTTAGAGGCCAAGAAATCTCAATATTTGTTGACTTCTAATGAACTTTCAGGATCAAAGTTGTTGAACCCGGTAGCTCTGATTCGATCAGCTTCACGCTCTTCTTCATCACGGTATTTGGTAAATAGTTCAAGCACTGGCAAGGAAGGTTGTGATGGCTCAAAGGATCTCTCTGAGGAACATTGTATGTTATCAGGTAGTCACCATTCCACATTGGACAGATTAAATACCTGGGAGAAGAAACTCTATGAGGAAGTCAGGTCTGGAGAGCGTATCCGAATTGCATATGAGAAGAAATGCAAGCAACTCAGGAACTTTGATGCAAAAGGAGAGGACCCCTCTTGCGTAGATAAAGCAAGAGCAGCCATTAGAGATCTTGATACCCAGATAACAGTTTCAATACATTCAGTTGAAGCTATTTCAAGGCGAATCGAAACTCTAAGGGATGAAGAGTTATATCCCCAACTTCTTGAATTGGTGCAAGGGCTGGAAAGGATGTGGAAAGTGATGGCAGAATGCCATCAGAAACAGAAGAGAACCTTGGATGAAGCTAAGATTCTTCTAGCTGGCACTTATTCCAAACTACATGCTAGAAAACAGTCTTCCATGTTAATGACGGATCCAAACAGGCTAGCTCGTTCAGCCTCCAATCTTGAATTTGAGTTAAGGAACTGGAGAAACGCCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCACTAACTGGATGGCTTCTGCGGTGCATGAGATCTGAGCCTGATGCATCCAAGTTGCCATGCTCTCCTCGAAGGTCAAGTGGCACTCACCCTTTGTTTGGACTCTGTGTTCAATGGTCAAGACGCCTGGATGCCATAAATGAAAAGGCAGTGCTTGATGGCTTAGACTTTTTTGCAGCTGGGATGGGGTCCCTCTATGCACATCAGTTGAGAGAAGATTCTAGGAGAAACTCGTTTGGACCAAAACAAAGTAATGGTAATATGGAACTAGTGGAAGCTGGTGAGGTAGAAGAGGTAATGGCTCCAGAGAAACTTGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTGCTTTGGATTCTGCTGAGGGATACAATGAAGTTGTTAAGCAATGGGACAATGTCAAGTGTCAAAATACTGCTTCTAGCAACACCAGGACATAG 2343 0.4302 MGCSHSRLDDEEAVQLCRDRKKFIKQAVEHRTRLATGHIAYIESLKRVSAALRDYIEGDEPREFSLDNAITPPFTPVKKKSGPGFIPISAKPFAATGAIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYYPPMQQYGFDGFFNMQSSPVNPSIFAYSPNNRPTIPPPSPQASQWDFFWNPFSSLDSYGYPAKSIDHAAMDDEYRGLRQVREEEGIPDLEEDETEHEDGVGKRNVAEERTRPNMNSSKEEVIVEDVEDDDDDDDDDDDEEEEEEEENEEEEEEEETDIEDATEHVAKDSQAHGSASFEVSKAQAAGHIESSHREMTIGKKDAVEETPGFTVYVNRRPTSMAEVINDIETQFTIVYNAAKDVAALLEAKKSQYLLTSNELSGSKLLNPVALIRSASRSSSSRYLVNSSSTGKEGCDGSKDLSEEHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERIRIAYEKKCKQLRNFDAKGEDPSCVDKARAAIRDLDTQITVSIHSVEAISRRIETLRDEELYPQLLELVQGLERMWKVMAECHQKQKRTLDEAKILLAGTYSKLHARKQSSMLMTDPNRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDASKLPCSPRRSSGTHPLFGLCVQWSRRLDAINEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGPKQSNGNMELVEAGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSAEGYNEVVKQWDNVKCQNTASSNTRT 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00252 780 Coils Coil 272 303 - -
Vian4g00252 780 MobiDBLite consensus disorder prediction 223 341 - -
Vian4g00252 780 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vian4g00252 780 PANTHER UNCHARACTERIZED 1 764 - -
Vian4g00252 780 MobiDBLite consensus disorder prediction 261 298 - -
Vian4g00252 780 Pfam Protein of unknown function (DUF632) 359 685 IPR006867 -
Vian4g00252 780 MobiDBLite consensus disorder prediction 235 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00252 Vian-Chr4 2656429 2660227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00252 1 721 Acyl Lipid Metabolism Gene Families AT2G27090 27.654 2.34e-67 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00252 - - gmx:100780704 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00252 4 2656429 2660227 Vian4g00252 4 2656429 2660227 ECH
Vian1g00616 1 6038970 6042524 Vian4g00252 4 2656429 2660227 PCT