Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00616 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAGGCAGTCAAGCTTTGCAAAGATAGAAAACGTTTCATCAAACAGGCTGTTGAGCAAAGAGCTCAATTTGCTACTGAGCATGTGGCATACATTCAGTGTCTGAAAAGGGTTTCAGCAGCACTGCTAGATTACTTTGAAGGCGATGAGTCGCACCATTTGCCGTTAGATTCATTCATAAGCCCACCTTCCACACCTGTGAAGAAAACCAGTCCTCTTAGCTTCATTCCCTTATCATCAAAATCCTTCAGCCCAACAACAATTGATTTTGATCCCAAATCAACTTTGAAGGTGAATTACTTAAGGCCGGGTGGTACTCCAGCAATTTCAGTTGAGGAAAGGCCTCAGTCGCCGGAAGTGGTTCGGGTCGAAACATATTATCCAATGCACCAGTTTGGCATTGATGATTTCTTTCCTATGCAATCCCCACCTGTGAATTCCTCAATTTTTGCTTATTCTCCCAATAATAGGCCTAATATCCCTCCTCCTTCACCTCAATCTTCCCTATGGGAATCATTTTGGAACCCTTTTTCAGCATTGGACTATTATGGTTACCCCAACCAAATTAGTTTTGGCCAGACTGGGATGGATAATGAGATCGGAGGACTGAGGCAGGTCCGAGAAGAAGAAGGAATACCAGACCTGGAACAAGATGGAACTGAACAAGAGGATTTTGATGAAAAGGGAAATGTAGCAGAAGTAAGAGGCAAAATTGATGTAAACTCGTCTAAAGAACAAGTCACGGTTGAAGATGTTGATGAACACAAGAAGGAAGTGGAGGGAACGGCTGCTGAAACTGGAACTGTGAATGAAGTCACAGAACAAGCCAATGGCGGTGAATGTTTACAGGTATCTAAAGCTCAAACTGCTGGTCAGGAAATGGAAACTGGTAATCAAGAAGCCAAGGAAGACACTCCTGGTTTTACTGTTTATGTAAACCAAAGACCAACAAGCATGGCTGAAGTGATAAGGGATCTTGAAGCTCAATTCACAACAATCTGCAATGCGGCTACTGATGTCTCCGCATTGTTAGAGGCCAAGAAAACTCAGAATCTGGCAGCACCAAATGAACTGTCAGCATCAAAAATGTTGAACCCAATAGCACTGTTCCGCTCAGCTTCCTTACGAACATCCTCATCAAGAATTTTAGCGAATTCTTCAGACACTACGAATGAGGATTTCGAAGGCACCGATGATCCATCCGAGGAAGATTGTTTGTTTTCTGTTAGTCATCAGTCAACGTTAGACAGGTTATATGCGTGGGAGAAGAAACTCTACGAGGAAGTCAGGTCTGGAGAACGTGTTCGAATTGCATATGAAAAAAAATGTCAGCAACTCAGGAATCATGATGTAAATGGAGAGGAACCCTCTTCCATTGATAAAACAAGGGCAGCCATTAGAGATCTACATACCCAGATAACAGTTTCAATACACTCAGTTGAATCTATTTCCAGGAGAATTGAAACTCTAAGGGATGAGGAGTTGCATCCCCAGCTGTTTGAACTGGTGCAAGGGCTTGCCAAGATGTGGAAAGTGATGGCAGAATGCCATCAGGCACAGCAGAGAACCTTAGATGAAGCCAAGATTCTTCTTGTTGACACTGATGCGAGAAAACAGTGTGCCAAATCACTAACTGATCGACAAAGGCTTGCTCGTTCTGTCTCCAGTCTTGAAACTGAACTGAGACATTGGCGAAACACCTTTGCATCGTGGATCAGTTCTCAAAGATCATATATCCATGGTCTAACTGGCTGGCTTCTAAGGTGTGTGAGATGTGAGCATGATCCATCAAAGCTAGCATGCTCTCCTCGTAGGTCTAGTGGCACTCATCCATTATTTGGACTTTGTGTTCAGTGGTCAAGGCGTCTAGATGTCCTTCAAGAAACTGCAGTACTTGATGGCATAGACTATTTTGCAGCAGGAATAGGGTCCTTCTATGTACAACAATCAAGAGAAGAAACTCGAAGAAATCAAGTTGGATCAAAAGAACACGATGAGAATATGAAAATGGTGGAAGTTTGTCATGTTGAAGAAGTGATGAGTACTGAGAAATTGGCTGAAGTTGCTATTGAGGTGCTCTGTGCTGGTATGTCAACTGCTATGAGCTCAATGGCAGAGTTTTCTGTTGATTATGCTGAGGGATACAATGAAATTGTTAAGAAATGGGAGAATGTGAACTTGCAGCAGATTTCTTGTGGAACTGATACATAG 2241 0.4279 MGCSQSRLDDEEAVKLCKDRKRFIKQAVEQRAQFATEHVAYIQCLKRVSAALLDYFEGDESHHLPLDSFISPPSTPVKKTSPLSFIPLSSKSFSPTTIDFDPKSTLKVNYLRPGGTPAISVEERPQSPEVVRVETYYPMHQFGIDDFFPMQSPPVNSSIFAYSPNNRPNIPPPSPQSSLWESFWNPFSALDYYGYPNQISFGQTGMDNEIGGLRQVREEEGIPDLEQDGTEQEDFDEKGNVAEVRGKIDVNSSKEQVTVEDVDEHKKEVEGTAAETGTVNEVTEQANGGECLQVSKAQTAGQEMETGNQEAKEDTPGFTVYVNQRPTSMAEVIRDLEAQFTTICNAATDVSALLEAKKTQNLAAPNELSASKMLNPIALFRSASLRTSSSRILANSSDTTNEDFEGTDDPSEEDCLFSVSHQSTLDRLYAWEKKLYEEVRSGERVRIAYEKKCQQLRNHDVNGEEPSSIDKTRAAIRDLHTQITVSIHSVESISRRIETLRDEELHPQLFELVQGLAKMWKVMAECHQAQQRTLDEAKILLVDTDARKQCAKSLTDRQRLARSVSSLETELRHWRNTFASWISSQRSYIHGLTGWLLRCVRCEHDPSKLACSPRRSSGTHPLFGLCVQWSRRLDVLQETAVLDGIDYFAAGIGSFYVQQSREETRRNQVGSKEHDENMKMVEVCHVEEVMSTEKLAEVAIEVLCAGMSTAMSSMAEFSVDYAEGYNEIVKKWENVNLQQISCGTDT 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00616 746 Pfam Protein of unknown function (DUF632) 329 652 IPR006867 -
Vian1g00616 746 PANTHER UNCHARACTERIZED 1 731 - -
Vian1g00616 746 MobiDBLite consensus disorder prediction 394 413 - -
Vian1g00616 746 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00616 Vian-Chr1 6038970 6042524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00616 412 740 Acyl Lipid Metabolism Gene Families AT2G27090 35.843 2.44e-55 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00616 - - var:108322116 1272.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00616 1 6038970 6042524 Vian1g00616 1 6038970 6042524 ECH
Vian1g00616 1 6038970 6042524 Vian4g00252 4 2656429 2660227 PCT