Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00157 ATGAAGGAGGATACTGAACTTGAGGAAGGAGAGGCTTTCTATTACAAGGACGATGATGAAGACAACATTGACCCTGATTCTTTCTCATACATTGATGAGAAGATTCAGCATGTTCTTGGCCATTTTCAAAAGGAGTTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGTTATGGTTCCTTTTTACCTACCCAAGAGCGCTCCCCTCGTCTATTGTCTCATCCAAGAACTCCACAAAGAAACCACAGCTCACCAAAGTTTAATAACAATCCTCACATGGAGGCTGTGTCTCATAACAAAAAAGCACCTACAAATGTGCCTCATCCTTCAAGGATTGAAAATGCTTCTCATAGTTCACATTTATTTCGTGATTTAAGAGAAGCTTCAGCAAATGATTCAGTGAAGAAAGAGCAAGGAATTTCTTCCTGTGATCAGGCTGAGAGGTGCACTTTGAAGGATGATACTACAAAAAATACAGAGAATTCAACTGATCAAAGGACACTGAAGTTGCGAATAAAAATGAAATCTAATATCTTAGCACAAAAGAATGCAGAAATTTATAGTGGCCTTGGACTTGATGACTCTCCCTCATCTTCAATGGATAACAGCCCTGTGGAAAGTGAAGGCATGCCACCTGTATCTCAAGAGAGTGATGAAGATTCTCCAACTGGCATGATTCAGGTTATGAGTTATTTTCCTATCCCTGGCGGTGTTCTGATATCTCCTCTACACGAAAGTGTGCTCAACCTGATAAAAAATGATAATAAAGCTATTGGGGACAGCAGGTTTTCATACCCTCTTAATGGTCATCGAGATCCTTGTTCCATGTCTATTGATGAACCAGATTCTTTTGTGCGGGCTGGACATTTGAAGAAGAACGCAGTGAGAATGGTGAGACAAAGTGAAAAGCAGTTGGAATTGAAGCATCCAAATGGCACCCTTTCTGAGAAGGAAACTACATTGCATAAAAAGAAAAAAATAGGAAATAGAACACCGGATTGTAAAGATTTCCTGCCTAATGAATTGAAATGGACACCTCTGTCAAGCTCAATTTGTGATGCTGGTGAATTTGCTGAAGTCACTGCTAAAGCTTCTGAAGCCTCCAAGGAGGTTAATGAGAATGGGGTGCTGGGCAGAATGGTTTCTGAAGAAGAATTGAAGGAAGAGTCATTAGAATCGATATCTGGTCAAGATTTTGGGAAGACTGTGAAACAAACCGTAGGAAATGGTTTTCTGAAAAAGGCTCCAGAACATAAGCTGGAAAGTTCCCACAAGGATAATTCTACAGACCCTATGAATAATAACTCGAGTAATACTTCCATTATTTCCAATAAGGTTGAACGTGAGGCATTAAAATGTAAGGCAGATTATAAGTCTGAGACCCGTCAGAAAATAAAGGCTGTGTCTGAGCGGAAGAATAAGTCGAAAGGTGATCAGAGTCCTGGAAAAGCTAAGGCAGTTGCAAGAAAAAAAAGCTTTGGTGGTACTAATAATGCAATGGGTTTTGAGAAAGGGAGTACTGGCTTTGACAGTACTTGTATAAATAAAATGAAGTCAAGGTCTCTGATGGACAAAAATTTCAGTGATAGTAACAGGGATTCAATGAAAGAAAAAAGATCAGAATGGAAAGTTGACAGTCTTGCTGGTAATGGTGAAATAAAAAATGCAAAAAATAGTAATGGAAAACAGAGTGCATTTGGGATTAAAGCAAAGGAGAGAATGAGTGGCCATAAAGTGGTCAAGCAGGTGCTAGCTGGGCCATGCATTAATGATACTTCGGCTTCATGTCCTATAGCTGAAAACAACATTGCACCTGAGATGATTTCATCAGCAGTAGCTGTACCTCAACTTATTGAAGAAGATTGGGTATGTTGTGACAGTTGCCAGAAATGGCGGCTCCTACCTACTGGTATGAAGCCTGAGCACCTTCCAGAGAAATGGCTGTGTAGCATGCTAAATTGGCTGCCTGGGATGAATTCTTGTGAGTTCAGTGAGGATGAGACAACAAAAGCACTTTATGCCTTATATCAAATGCCAATTTCCCAGGTTCAAAATAACATGCAAAGCCATGGCACTGAAACTGCGATTGGAGTTAGTTCTCCAAATTCTTTACAATATGGCCTAAATCAAAATATGTCCAGTTCTGATATGTCTGACCGAGGAAGGAAGAAACTTGTTATTAAGGAGAAGACAATGTCTGGAATTAATAATGACATGCATCGGTTCTCAAATTTGGTGAAGGCCAATGTTCAAGTATCTGGAAAAAATAGAAGCTTGAACGGCTTGAATCAGCATCCTGCTGACTTAAACCCAGTGAAGAAGATGACGAACTCTTCTAAGCATCTTAGTAGGCCTGACAACATGATAGAAGAGAAACATGTGCCTAAAGAGAATGAAAAGCAAGTGAATGGAGGTGATAGAAAGCATGTTAAGTTGAAACGGAAGGTGGATGCTGATCAATATAAATCGGGAACTCAGAAGAAATTAAAAACTGAAAATGTTTTCTCTGCTAATATTCAATCAAATTCTGACATGAACCTTGAGAAGGTGTCTCTATATTCAAGAAATGGTTTGCCAACGAAAGCTAGTGGGAAGGATATGAGAAAGTATGATGAATATTGTTTATCTGAGCATGTATCTGACAGATTACCAGTCACTGTAAAGAAAGAGGGAGATCAGGCTCAGGTCTCATCTGGTTTAGCAAAGAAAAGGAAATTGAAGGACCGGCTTGATGATGAAAAGCAGTATGGTGAAGAGGGTGATGCAACCGAATTTGGCAAAGAAAAGAAATACAGAATTTTGAAGTCAGTAACTGAAGGCGACAATAAATTAAGTAAGGGTGGTATAAGGGAAGTTTGCGGGGCAGGCAATGGGGACCATATGGCTGTTGGCACAGAAGTCAGACTTGGTGACAAACGCAACCAACTAAGGAAGCATAGGAAAAATGTTGCATCTCTTCATGCTTCAGATGGTATTGATCAAGTGCGCAAGGATTTGGACCCTAGACCACATTCATTGGCAGCAACTTCAAGCTCTTCTAAAGTCTCAGGTTCTCATAAAGCTAAAACGAAGCTTGAAGATGTGAGAAGTTCACCTGTTGAATCTGTTACCTCGTCACCTTTGAGGGCCTTCAACTTGGATAAGAATAATTTTGCAGTAGGAGACACTTCAGTGAAAGACAATGTCACAAAAGGTGGACAGTCTGTGGTAGGTTCCAAGAGAAATGTGGATAACAGGAACAGAAAACTATCAGTAAAATTGAAGGAGGGTAGAATTCCGCATGACTTACATCCTACATCCCACAAATTATCTTCCACAGAGAACCAGGTTGAGGATGCTAAAGACATATCCAGGCTCCAAGCTAAAAAACCTTCTGAACTAAAGAATAATCATTTGCTTGAAGGTGGTGTTCATGTTGAACAATCTGGCTATTGTGCTAATGGTGTACATAAAGAGGAGAAAGTAAAGAAGGAAAACCAGGAAAGTGAACTTTCTTGGCAGAAATCTGGTAAGGTTACATCATTGAACAGCAAGGAGAAAGGCAAAAAAATTTCTTCTCATGTTTGTACTGATAACATAAAGACATCAGTTTCAGATACTGTTCATTCAAAAAAAGGTGGGAGGTATAATTCAGCAGCTGATCCCAGTAACCATGCACCTGATGCTGAGACAAAAAATGTTGTTAAATATACTTTACCCAAGTCTAAGAGTGAAATTGAGATTATTAGTCAGAAAAGTGCTCTAATACAAGGGCCAAATGAAACTGGAAAGCAAACTGAGATAAAACCAAGAGACTTTGAGAAATCAGCTCCAGAGATTGATGTTCAACGTAGCAATGAGAGAAAGGCTATCTCCTGGCAAAACTCAACTCACGATTTTGAGGAAGAAAACAAAGCTAATCATGTAAGCACAGAATCAAGAGTTGGGAAATCGAAAGTTCTCTCATCTGCAGCAGGTGAACTCAAAAGGGAAGCATTGAATATGGGTTCTAGAACTGTACCTCAGTATCAAAAGGGAGGAATGGCTAATGAGCATCTTGTCAATGTTTCTGACAATGGTGATTTGGTCAAGTCAATGAGGAGTTTTGCTGATATTAGTAACAATGCTGGAGTTAATTGTAGCTCTGGAAATTTCCTGCCTGATCAGCAACCCACTGTTTCAAGTCCTCTGAGAACAAATTTTAACCAAACTACTGTTGACACCCTGGAAGAAGCCGCAACACTAAAAGATAGAGCAGATAGTTATAAGAACTCTGGGTTTGACTTTGAAAGCAATGAGACATACTTTCAAGCTGGGTTGAAGTTTTTGCATGGAGCATCTATTTTAGAAAATTCTCACAATGACAGTAACAAACTTGGGGAAACGAGTCAAATGCAAATTTATGGTACTGCAGCCAAACTTTTCAAATGCTGTGCCCATGAATATGAAGCTCGTCAAGAAATGGCTGCTGCTGCTTTGGCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTCTACTGTAAGAATTCCAGTACTAACAGAGATCGACATGAGTTACAATCAACTCTTCACTTGGCTTCTCAAGGCGAATCTCCTTCATCTTCTGCATCCGATGTTGATAACCTGAACAATCAGGCAGCAGCGGATAGGGCTACTTTGCCTAGGGGTACCAATAGTCATGTTGCTATCAACCACGTCATATCTGCTCGAACTCGTCCAAGTTTAATCAGGCTTCTTGATTTTACTAAGGACATACATTTGTCAATGGAGGCTTCTAGGAAATGTCAGAGCACTTTTGCGGCTGCTAGTGTGATCCTGGAAGAATCAAGGAACAAGGACTGTATAGCTTCTATTCGGAGTGTTGTTGATTTCAGCTTCCAGGATGTAGATGAGCTTGTACGTCTTGTTTGGACAGCATCAAAAGCAATAAGCCGCGCTGGTCTTGGTGGTGCTAGAGATTAA 4956 0.4009 MKEDTELEEGEAFYYKDDDEDNIDPDSFSYIDEKIQHVLGHFQKEFEGGVSAENLGAKFGGYGSFLPTQERSPRLLSHPRTPQRNHSSPKFNNNPHMEAVSHNKKAPTNVPHPSRIENASHSSHLFRDLREASANDSVKKEQGISSCDQAERCTLKDDTTKNTENSTDQRTLKLRIKMKSNILAQKNAEIYSGLGLDDSPSSSMDNSPVESEGMPPVSQESDEDSPTGMIQVMSYFPIPGGVLISPLHESVLNLIKNDNKAIGDSRFSYPLNGHRDPCSMSIDEPDSFVRAGHLKKNAVRMVRQSEKQLELKHPNGTLSEKETTLHKKKKIGNRTPDCKDFLPNELKWTPLSSSICDAGEFAEVTAKASEASKEVNENGVLGRMVSEEELKEESLESISGQDFGKTVKQTVGNGFLKKAPEHKLESSHKDNSTDPMNNNSSNTSIISNKVEREALKCKADYKSETRQKIKAVSERKNKSKGDQSPGKAKAVARKKSFGGTNNAMGFEKGSTGFDSTCINKMKSRSLMDKNFSDSNRDSMKEKRSEWKVDSLAGNGEIKNAKNSNGKQSAFGIKAKERMSGHKVVKQVLAGPCINDTSASCPIAENNIAPEMISSAVAVPQLIEEDWVCCDSCQKWRLLPTGMKPEHLPEKWLCSMLNWLPGMNSCEFSEDETTKALYALYQMPISQVQNNMQSHGTETAIGVSSPNSLQYGLNQNMSSSDMSDRGRKKLVIKEKTMSGINNDMHRFSNLVKANVQVSGKNRSLNGLNQHPADLNPVKKMTNSSKHLSRPDNMIEEKHVPKENEKQVNGGDRKHVKLKRKVDADQYKSGTQKKLKTENVFSANIQSNSDMNLEKVSLYSRNGLPTKASGKDMRKYDEYCLSEHVSDRLPVTVKKEGDQAQVSSGLAKKRKLKDRLDDEKQYGEEGDATEFGKEKKYRILKSVTEGDNKLSKGGIREVCGAGNGDHMAVGTEVRLGDKRNQLRKHRKNVASLHASDGIDQVRKDLDPRPHSLAATSSSSKVSGSHKAKTKLEDVRSSPVESVTSSPLRAFNLDKNNFAVGDTSVKDNVTKGGQSVVGSKRNVDNRNRKLSVKLKEGRIPHDLHPTSHKLSSTENQVEDAKDISRLQAKKPSELKNNHLLEGGVHVEQSGYCANGVHKEEKVKKENQESELSWQKSGKVTSLNSKEKGKKISSHVCTDNIKTSVSDTVHSKKGGRYNSAADPSNHAPDAETKNVVKYTLPKSKSEIEIISQKSALIQGPNETGKQTEIKPRDFEKSAPEIDVQRSNERKAISWQNSTHDFEEENKANHVSTESRVGKSKVLSSAAGELKREALNMGSRTVPQYQKGGMANEHLVNVSDNGDLVKSMRSFADISNNAGVNCSSGNFLPDQQPTVSSPLRTNFNQTTVDTLEEAATLKDRADSYKNSGFDFESNETYFQAGLKFLHGASILENSHNDSNKLGETSQMQIYGTAAKLFKCCAHEYEARQEMAAAALAYKCMEVAYMRVVYCKNSSTNRDRHELQSTLHLASQGESPSSSASDVDNLNNQAAADRATLPRGTNSHVAINHVISARTRPSLIRLLDFTKDIHLSMEASRKCQSTFAAASVILEESRNKDCIASIRSVVDFSFQDVDELVRLVWTASKAISRAGLGGARD 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00157 1651 MobiDBLite consensus disorder prediction 70 99 - -
Vian4g00157 1651 PANTHER CW-TYPE ZINC FINGER 1 1643 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 889 922 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 528 549 - -
Vian4g00157 1651 Pfam CW-type Zinc Finger 626 671 IPR011124 GO:0008270
Vian4g00157 1651 MobiDBLite consensus disorder prediction 1192 1209 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 458 496 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 1159 1227 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 1273 1293 - -
Vian4g00157 1651 ProSiteProfiles Zinc finger CW-type profile. 620 673 IPR011124 GO:0008270
Vian4g00157 1651 MobiDBLite consensus disorder prediction 987 1007 - -
Vian4g00157 1651 Gene3D - 620 675 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 760 812 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 905 922 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 431 446 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 788 812 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 760 787 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 985 1039 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 196 227 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 194 227 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 458 489 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 416 446 - -
Vian4g00157 1651 MobiDBLite consensus disorder prediction 66 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00157 Vian-Chr4 1409867 1417729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00157 - - vra:106762170 3064.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00252 1 2211164 2218886 Vian4g00157 4 1409867 1417729 PCT