Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00146 ATGGAATACAGAACCTTAGAACTCAACATCATATCAGCAAAAGACATAAAGAATGTTAATCTTTTCTCGAAGATGGACGTTTACGTCGTCATTTCGCTCACCGGTGACCCTTTTCATCTTCAAAGTGCAACCACCCATGTGGACAAAGATGGCGGATGCAACCCCAAGTGGAACTATCCGGTGAAATTCTCCGTCAACGAAGCGCTGGCAAAGGAGAACCGTTTGACCCTCGAGGCCAAGCTCATCTCCGACCGCACCCTCGGCGACACCGTCATCGGCACCGTCCATGTTCCTCTCAGGGAGCTCGTCGACAACCCCGGCGAAGACAACGGCTTTCGACACGTCAGTTACAAGGTCGTCAAATCTTCAGGAAAATCCAAGGGATCATTCAATTTCTCTTACAAATTCGCTGAAAAGGTCTCTAATTCCGTCGCCGCCGGAAGGCTGTCCGCCACGGCATCAAAAGCAGAAACGGAGCCAGTGATGGCTTACCCTCCTCAGACCTCCGCCGGAACAAGTGCAATTCCTTACGGAACATCACATCCTCCGCCGCCCAACCCGGCTGCACAATATGGATACCCACCCCAACAACCGTCTTACACCGGATACCCACCGGTTCAATCTGGAAATGGGTATCCACCTCAACAGAGCTACGGTGGATACCCCCCACAACAAAACGGATATGGTGGATACCCACCGCAAAATGGTTATGGTTATGGGTATCAAGGGTACCCTCAACAAGGTGGATATGGATACCCACCAGCCCAGAAACCAAAGAAGAACAATTTCGGAATGGGGTTGGGAGCGGGATTGCTTGGTGGTGCTTTGGGTGGTATGTTGATCGGAGATATGGTATCTGATGCTGCGGATTATGATGCTGGATACGATGCTGGATTTGATGATGCTGGTGGATTTGATTTTTAA 924 0.5032 MEYRTLELNIISAKDIKNVNLFSKMDVYVVISLTGDPFHLQSATTHVDKDGGCNPKWNYPVKFSVNEALAKENRLTLEAKLISDRTLGDTVIGTVHVPLRELVDNPGEDNGFRHVSYKVVKSSGKSKGSFNFSYKFAEKVSNSVAAGRLSATASKAETEPVMAYPPQTSAGTSAIPYGTSHPPPPNPAAQYGYPPQQPSYTGYPPVQSGNGYPPQQSYGGYPPQQNGYGGYPPQNGYGYGYQGYPQQGGYGYPPAQKPKKNNFGMGLGAGLLGGALGGMLIGDMVSDAADYDAGYDAGFDDAGGFDF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00146 307 MobiDBLite consensus disorder prediction 193 231 - -
Vian4g00146 307 MobiDBLite consensus disorder prediction 178 192 - -
Vian4g00146 307 Gene3D C2 domain 4 138 IPR035892 -
Vian4g00146 307 Pfam C2 domain 5 106 IPR000008 -
Vian4g00146 307 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Vian4g00146 307 MobiDBLite consensus disorder prediction 164 234 - -
Vian4g00146 307 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Vian4g00146 307 PANTHER INGRESSION PROTEIN FIC1 1 283 - -
Vian4g00146 307 SMART C2_3c 5 111 IPR000008 -
Vian4g00146 307 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00146 Vian-Chr4 1338247 1339170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00146 - - gmx:547451 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00146 4 1338247 1339170 Vian4g00146 4 1338247 1339170 ECH
Vian1g00261 1 2313350 2314186 Vian4g00146 4 1338247 1339170 PCT