Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian1g00261 | ATGGAACACAGAACGCTGGAACTCAGCCTCGGATCGGCGAAGGATCTGAAAAACGTGAATCTCTTTTCCAGGATGGACGTGTACGCCGTCGTTTCGCTCTCCGGCGTCCAAAAGATCAAGACTCCCGTCGACAGAAACGGCGGCACCAACCCCACGTGGAAAGTTACCGAGAAGTTCACCATCGATGAATCGCTGGCGCGGCAGAATCGCTTGACCCTCGAAATCAAGCTCCGCTGCGAGCGCAACCTATCCGCCGACAAAGAAATCGGCCAGGTCCTCGTCCCCATCAGGGAGCTCCTCGACCAACCCGGTGATGGAAAAGCCTTCCAGCATGTCAGTTACCAGGTCAGAAAACCCTCCGGCAAACCCAAAGGATCGTTTAGTTTTTCTTACAGATTTAGCGAAAAATTCACTGAGCCCGGGATATCGTCAGCGCCGTCAGCGCCTGTGATTTCGGTTGCTCCCAAGACGGAGCCGGTGACGGCTTATCCTGCTCCCGCGGTGGGGTCCACTTCTGCCTCGTATCCCGTCGTGTATCCTCCTCCCCCGCAGCCACAATATGCGGGCGGATATGGGTACCCTCCGCCGCCACAAGCGGCATATGGGTACGCTCCACAAGCGGCTTACGGGTACGCGCCGCAACCCGGGTACGGTTACCCTCCTGCTCCTGCTCCTGCTCAAGGAGCTCGGAAGAACAAATTTGGAATGGGATTGGGAGCGGGTTTGCTTGGTGGAGCGTTGGGTGGGCTTCTGATCGGAGACATGATATCTGATGTGGGTTCTTACGATGCTGGCTATGACGCTGGTTTTGGAGATGCCGGTGGATTTGATTTTTAA | 837 | 0.5615 | MEHRTLELSLGSAKDLKNVNLFSRMDVYAVVSLSGVQKIKTPVDRNGGTNPTWKVTEKFTIDESLARQNRLTLEIKLRCERNLSADKEIGQVLVPIRELLDQPGDGKAFQHVSYQVRKPSGKPKGSFSFSYRFSEKFTEPGISSAPSAPVISVAPKTEPVTAYPAPAVGSTSASYPVVYPPPPQPQYAGGYGYPPPPQAAYGYAPQAAYGYAPQPGYGYPPAPAPAQGARKNKFGMGLGAGLLGGALGGLLIGDMISDVGSYDAGYDAGFGDAGGFDF | 278 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian1g00261 | 278 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Vian1g00261 | 278 | CDD | C2_SRC2_like | 5 | 129 | IPR044750 | GO:0006952 | |
| Vian1g00261 | 278 | Pfam | C2 domain | 5 | 103 | IPR000008 | - | |
| Vian1g00261 | 278 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 134 | IPR035892 | - | |
| Vian1g00261 | 278 | SMART | C2_3c | 5 | 108 | IPR000008 | - | |
| Vian1g00261 | 278 | Gene3D | C2 domain | 1 | 145 | IPR035892 | - | |
| Vian1g00261 | 278 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 254 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian1g00261 | Vian-Chr1 | 2313350 | 2314186 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian1g00261 | - | - | gmx:100784458 | 252.292 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vian1g00261 | 1 | 2313350 | 2314186 | Vian1g00261 | 1 | 2313350 | 2314186 | ECH | |
| Vian1g00261 | 1 | 2313350 | 2314186 | Vian4g00146 | 4 | 1338247 | 1339170 | PCT |