Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00133 ATGGGTGCGATGACCAACAACCGCAAGCGCACCGAAGAATGCATGAACGTACACCTCACTAATTCAGATTCCTCCCGTAAACGCTCCAAATTATCTACCAAACCCGTTCCGTCCGCCGCCAGCGCCATCGCGCGACTCTCCCGGTATCCGCAGGTTCACGCGCCGTTCGCGAGGGAGGTTCACGCACCGTGTCGGCCGACAAAATTTCCACTCGCTGCTAGGGTTAGCAGTCGCGCCGGCGATGCCATGGGGAACGTTCTGATCGCGAAGTTCGAGAAGGCGAAGCGTTCGGCGTTGGAGCTATGTAGCTCTGTAGTGGAGAAGGGAAAGGAGGTGATTGTAGTGGACGCGGAGAGTGATGAGCCCTGTGCGGATTCGAGTGTGGAAGAGCCGCATGGTGACGGTGACAAGTTTAGGGTTCAGCAGCAGTCGCAGTCGACGTTATCGTTTGATTCGGAGCTGAGGAATGCGGAATTGAAGGTAGCGAGTAGAGGGGAGTTGTGGGGTTCTGAGACGCAGCTTGATGTTGAAAGTGTTCATGCGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAATGGCACATTCCAGAGGCTGAATTTTGAGATTGACCTGAATGAGAAGCGCAGGGACCATTTTAATTTGTTGAGGCCGAAGAAAGAATTGGAGGATTCAGAAGCGCTGCAAGAACCATTTGTTGCTCTTAGTAGTGAGGAAGAAGATGAGGTTCAGCGTGCCTTCTCTGCCAACCGTTGGACAATCTTGGTTACCCATGAGAATTCTAATATTGAGATTACGGGAGAAAAGTTTCAATGCCTTAGGTCAACTGGATGGTTAAATGATGAGGTGATAAATTTGTATTTAGCTTTGCTGAAGGAGAGGGAACAAAGACAGTCACATAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGCCCAAATGGTTATGATTTCAAATCTGTCAGAAGATGGACAAGCCAACGGAAATTGGGATACAGTTTACTTGAATGTGATAAAATATTTGTACCTATCCATCAAGAGATACATTGGTGCTTGGCAGTCATCAATAATAAAGATAGGAAATTGCAGTATCTTGACTCAATGAAAGGAGAGGATAGATCTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAAAATGGACAAGATATTGGTGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTTCAGAAAAATGGGTGTGATTGTGGGGTGTTTATGATCAAATATGTGGACTTTTATAGCAGGGGCCTGGAGCTATATTTTGACCAGGAAAACATGCCTTACTTCCGGCGTAGGACAGCTAAGGAGATCTTGAGACTGAAAGCTGAATGA 1398 0.4549 MGAMTNNRKRTEECMNVHLTNSDSSRKRSKLSTKPVPSAASAIARLSRYPQVHAPFAREVHAPCRPTKFPLAARVSSRAGDAMGNVLIAKFEKAKRSALELCSSVVEKGKEVIVVDAESDEPCADSSVEEPHGDGDKFRVQQQSQSTLSFDSELRNAELKVASRGELWGSETQLDVESVHAYKKLLEDVGRRNGTFQRLNFEIDLNEKRRDHFNLLRPKKELEDSEALQEPFVALSSEEEDEVQRAFSANRWTILVTHENSNIEITGEKFQCLRSTGWLNDEVINLYLALLKEREQRQSHKFLKCHFFNTFFYKKLISGPNGYDFKSVRRWTSQRKLGYSLLECDKIFVPIHQEIHWCLAVINNKDRKLQYLDSMKGEDRSVLEKLAKYFADEVNDKNGQDIGVNTWKKEFVKDLPVQKNGCDCGVFMIKYVDFYSRGLELYFDQENMPYFRRRTAKEILRLKAE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00133 465 MobiDBLite consensus disorder prediction 1 37 - -
Vian4g00133 465 ProSiteProfiles Ubiquitin-like protease family profile. 263 435 IPR003653 GO:0006508|GO:0008234
Vian4g00133 465 Pfam Ulp1 protease family, C-terminal catalytic domain 278 459 IPR003653 GO:0006508|GO:0008234
Vian4g00133 465 Gene3D Adenoviral Proteinase; Chain A 210 463 - -
Vian4g00133 465 FunFam Ubiquitin-like-specific protease ESD4 222 463 - -
Vian4g00133 465 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 131 458 - -
Vian4g00133 465 SUPERFAMILY Cysteine proteinases 231 463 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00133 Vian-Chr4 1237816 1244104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00133 K08592 - gmx:100802161 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00278 1 2454296 2460149 Vian4g00133 4 1237816 1244104 PCT