Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00102 ATGGCGGCGGGGACAATGGCGACGGCTGCCGGGGCGGCGTTGATGCTGTTTTATGTGCTGAGCCGGCGGCTGTCGCGGAAGGCGGAGGAGGACAGCGAGGATCACGGAGGCGGCGGCGACGTGTCGAAATCGAGCAGATCGGTGCGCCGGAGAAGGCTTTCGAGGCGGCCGGCTCAGGCTCCGGCGACGCTGCTGGAGTCGATCGGAACGCTGTCGGAGACTTTGAGGTTCACGTATTCCGAGACCTTCGGGAAGTGGCCAATCGGCGATTTGGCCTTCGGAATCAACTACTTCATGCGCAAGCAGGGTAATTTGGCAGTTGCAAGTGTCTATGCTGGGAGTGATTCTGTGCAGCTCAAAGGGGATGGGATAATTGTGGAGCTGTACGAGTTGTTGAGGCTTTTGACTTTGTGTATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAACCGAAAGCTGGGCTTCTGAAGCCTGCATTTACAATTATATGTGATACACAATCAAAATGTTTACTTCTACTGATCCGGGGTACTCATAGCATAAAGGACACACTGACAGCTGCAACTGGTGCTGTAGTCCCTTTTCACCATTCAGTTTTAAATGATGGTGGGATTAGCAACTTGGTTTTGGGATATGCACATTGTGGCATGGTTGCTGCTGCTAGATGGATTGCAAAGCTTTGCACTCCTACCCTACTTAAGGCTCTTGATGAATTTCCAGACTTCAAAGTCAAGATTGTTGGACACTCACTTGGTGGCGGTACTGCTGCACTATTGACCTATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACATGTGTCACTTTTGCTCCAGCTGCTTGTATGACATGGGAGTTAGCAGAATCAGGAAAACACTTTATTACAACCATTATAAATGGTTCTGATTTGGTGCCAACATTTTCAACTTCATCCATTGATGATCTCCGATCTGAGGTCACTGCATCCTCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACGAAGGTCCTGAATGTTGTCTACCGATCTGCAACTGCACTTGGATCTCGCTTACCATCTATTTCCAGTGCAAAAGCTAGGGTAGCTGGTGCTGGTGCTATTCTATGGCCAGTAACCAGTGGCACACAGGTTGTGATGAGGCGTGCACAGAGTGTTGCTGAGGCTGTTGTCAGAACTCGGTCATCACTGTCATCATGGTCTTGCATGAGTGCACGCCGCAGAAATGTGGGTCCATCAGTAAACTCTAAATCAGAGGATTTAACCGAAGCATCTCTAATATCTGCAAGGAACACAGAATCTGTTATGACTGAAGAGGTAGTAGTAGAACCTATGCTTAAGGATGAAAGTACATCCTCAAGTGGAGGATCTGGCCATGATGACACAGATGAAGAAGAGCCTCTCATTCCTGCTAATCAAGACATCACTGCAACAGCTGTTGACGAATTAACAGAAGGCCAGTTATGGTATGAGCTAGAGAAGGAGCTTCAAAAGCAGGATAATGTTATGAACATTCATGCTCAAGAAGAAGAGGCCGCAGCAGCAAAAGAGATCACAGAAGAAGAGAGTCAACTTGTTGATGCTGCTGCAGAATGCAGTAGCAGTTCAATCACTACATCAGACAATTTGGACAGCCATCGATTTTATCCCCCTGGCAGGATCATGCATATTGTTCCTGTACCTTCATCGGATGAATCAAATTCAAATTCTGATGACCCTATAGAAGAACATGTCTGCTTATATGAAACTCCCAGAGAGCTGTACAGCAAGCTCAGACTTTCAAGAACCATGATAAATGATCATTACATGCCCATGTATAAGAAGATGATGGAACTATTAATACGAGAACTAGAGAAAGATAGCAACTGTAATATCTTGAATTAA 1929 0.4609 MAAGTMATAAGAALMLFYVLSRRLSRKAEEDSEDHGGGGDVSKSSRSVRRRRLSRRPAQAPATLLESIGTLSETLRFTYSETFGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDSVQLKGDGIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIICDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALDEFPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMRRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSVNSKSEDLTEASLISARNTESVMTEEVVVEPMLKDESTSSSGGSGHDDTDEEEPLIPANQDITATAVDELTEGQLWYELEKELQKQDNVMNIHAQEEEAAAAKEITEEESQLVDAAAECSSSSITTSDNLDSHRFYPPGRIMHIVPVPSSDESNSNSDDPIEEHVCLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSNCNILN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00102 642 Pfam Lipase 3 N-terminal region 52 114 IPR005592 GO:0016042
Vian4g00102 642 SUPERFAMILY alpha/beta-Hydrolases 158 325 IPR029058 -
Vian4g00102 642 CDD Lipase_3 178 329 - -
Vian4g00102 642 MobiDBLite consensus disorder prediction 461 481 - -
Vian4g00102 642 Pfam Lipase (class 3) 187 323 IPR002921 GO:0006629
Vian4g00102 642 Gene3D alpha/beta hydrolase 158 359 IPR029058 -
Vian4g00102 642 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 636 - -
Vian4g00102 642 MobiDBLite consensus disorder prediction 28 47 - -
Vian4g00102 642 MobiDBLite consensus disorder prediction 28 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00102 Vian-Chr4 914322 920108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00102 1 637 Acyl Lipid Metabolism Gene Families AT4G16070 65.770 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00102 - - gmx:100782138 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00102 4 914322 920108 Vian4g00102 4 914322 920108 ECH
Vian1g00304 1 2674644 2685388 Vian4g00102 4 914322 920108 PCT