Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00304 ATGACCGCCGGTGCAATGGCGACGGCCGCCGGAGCGGCAGTGACGTTGTACCTCTTGTTGAGGAGGAGGAAGAAAGCCGAAGAGGAGTGGTCGAGAGCGCGGACCCTGAGGGTGAGGCCAGCTCAGGCGCCGGCGAATCTGTTCGAATCGATCGTGACGTTGTCGGAGACGCTGAGGTTCACTTACTCCGAGACTATTGGGAAATGGCCAATAGCAGATTTGGCCTTCGGCATCAATTCCTTCATGCGCAAAAAGGGTGATTTGACAGTTGCGGATGTGTATGGTGGAAGTGGTTGTGTGGAGTTGAAAGGCCCTGATGTTGTAGCCGACTTAGAGGAACTATTGAGGCTGTTGACTCTGTGCATGCTTTTCTCCAAAAAACCGTTTCCCGAATTTTTAGATTCTGCTGGATTTTCACAGGACCATGTCCTTCTCCACAGCCCCAAAGCTGAGGTGGAAGCTGTATTAGCTGTTGAGTTTATTGGACAGCTTCTGAAGCCCGCATTTACTATTATACATGATATGCAGTCAAGATGTTTTCTTCTGTTGATCCGGGGAACTCATAGCATAAAAGACACACTCACAGCTGCAACTGGGGCTATGGTTCCTTTTCACCATTCCATTGTAAGTGATGGACAAATTAGCAACTTGGTTTTAGGACATGCACACTGTGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAACTCTGCACTCCTGCATTACTTAAGGCACTTAATGACTGTCCAGACTCAAAAGTCAAGGTTGTGATAAAGCATGCACAAAGTGTTGCAAAAGCTGTTGTCAAAACTATGACTGCACACAGTCCGAATATTGGTCCCCTGTCGAAATCTAAATTAAATAACTTGGTCAAAATTTCTCTCGAACCAGAACCAGAAAATATAAGTACATCTCTTTTGACCAAAAGTGTGTCTGTACTTAATAAAGACGAACCAAACTCCTCTAGTGGAAAATCTGAACTTGATGTGGCAGATGAAGAGGAACTAGTCATTGATACCAATGAACACATTACAGAAGGTGAATTGTGGCATGAACTGGAGAAGGAACTTGAAAAACAGAATATATTGAACATCCTGACTCAGGTAGAAGAAGCAGATACAGAAAATGAGATAATTGAGGAAGATCAGCTTGTTAATGCTAACAATTCAATCTCAACATCTGGCCTTGTGTTGGCACGACCAGTCGTCTCTATACGATCATTGACCAGTCGCCTTTCACCCCCTGACAGGACAGGTTAG 1257 0.4519 MTAGAMATAAGAAVTLYLLLRRRKKAEEEWSRARTLRVRPAQAPANLFESIVTLSETLRFTYSETIGKWPIADLAFGINSFMRKKGDLTVADVYGGSGCVELKGPDVVADLEELLRLLTLCMLFSKKPFPEFLDSAGFSQDHVLLHSPKAEVEAVLAVEFIGQLLKPAFTIIHDMQSRCFLLLIRGTHSIKDTLTAATGAMVPFHHSIVSDGQISNLVLGHAHCGMVAAARWIAKLCTPALLKALNDCPDSKVKVVIKHAQSVAKAVVKTMTAHSPNIGPLSKSKLNNLVKISLEPEPENISTSLLTKSVSVLNKDEPNSSSGKSELDVADEEELVIDTNEHITEGELWHELEKELEKQNILNILTQVEEADTENEIIEEDQLVNANNSISTSGLVLARPVVSIRSLTSRLSPPDRTG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00304 418 SUPERFAMILY alpha/beta-Hydrolases 164 255 IPR029058 -
Vian1g00304 418 Pfam Lipase 3 N-terminal region 38 115 IPR005592 GO:0016042
Vian1g00304 418 Gene3D alpha/beta hydrolase 137 256 IPR029058 -
Vian1g00304 418 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00304 Vian-Chr1 2674644 2685388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00304 1 256 Acyl Lipid Metabolism Gene Families AT4G16070 61.194 3.17e-106 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00304 - - gmx:100801263 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00304 1 2674644 2685388 Vian1g00304 1 2674644 2685388 ECH
Vian1g00304 1 2674644 2685388 Vian4g00102 4 914322 920108 PCT