Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02673 ATGGGGTTTTCTTCCTTTCTGGGTCGCGTTCTCTTTGCCTCCCTCTTCATCCTTTCGGCATGGCAGTTGTTTAATGAATTTGATGCCAATGGTGGACCCATTTCGAAGGAGTTGATTCCCAAGCTCACTGTTGTGAAGAAAAATTTGTCCTCCAAATTGGGGGTGGCACTACCAGATATTGATGCCCGGCAATTCATTTCTGTTATCATATTTCTCAAGGGGGTTGGTGGGATTTTGTTTGTGTTTGGCAGCACATTTGGATCTTTTCTACTGCTCTTACATTTGGCGCTTACCACTCCACTTCTGTACGATTTCTACAACTATAGACCTGGAAAGCCCAAGTATAATCATCTGCTGAATGAATTCATGCTGAACACGGCACTTTTTGGGGCATTGCTATTCTTTATTGGAATGAAGAACTCAATTCCCAGGAGTCAGCTCAGGAAGAAGACCCCTAAAGCGAAGACAGTTTAG 474 0.4367 MGFSSFLGRVLFASLFILSAWQLFNEFDANGGPISKELIPKLTVVKKNLSSKLGVALPDIDARQFISVIIFLKGVGGILFVFGSTFGSFLLLLHLALTTPLLYDFYNYRPGKPKYNHLLNEFMLNTALFGALLFFIGMKNSIPRSQLRKKTPKAKTV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02673 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Vian3g02673 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02673 Vian-Chr3 41453972 41455864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02673 - - gmx:100786502 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02673 3 41453972 41455864 Vian3g02673 3 41453972 41455864 ECH
Vian2g02189 2 41847860 41855999 Vian3g02673 3 41453972 41455864 PCT