Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02189 ATGTTTGAAACAAAACGACAAAAAAAGGAGCATGGACAAAACAAAAGATTTAATGCTTATGGGGTTGATGGCGGACCCGCAGCAAAAGCACTGAGACCGAAGTTTGATGCATTTGCCCAACAAGTACATTCTAGAGTTGGATTTCAACTTCCGGATATCGATCTTTTGCACCAATTGATTACTACTCCTATACTGTATGATTTCTACAATTATGACAGCGAGGACAAAGAATTTATTCAACTTTTCATCAAATTTACTCAGAATATGGCCCTCTTCGGGGCTTTGTTGTTTTTCGTTGGGATGAAAAACACCATTCCTAGAAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACTTATTAG 363 0.3857 MFETKRQKKEHGQNKRFNAYGVDGGPAAKALRPKFDAFAQQVHSRVGFQLPDIDLLHQLITTPILYDFYNYDSEDKEFIQLFIKFTQNMALFGALLFFVGMKNTIPRRQPKKKAPKTKTY 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02189 120 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g02189 120 Pfam HR-like lesion-inducing 55 101 IPR008637 -
Vian2g02189 120 PANTHER HR-LIKE LESION-INDUCER 15 55 - -
Vian2g02189 120 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02189 Vian-Chr2 41847860 41855999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02189 - - gmx:100817488 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02189 2 41847860 41855999 Vian2g02189 2 41847860 41855999 ECH
Vian2g02189 2 41847860 41855999 Vian3g02673 3 41453972 41455864 PCT